Evidence map›Paper›PMID 39386737›Full record

ArticlebioRxiv : the preprint server for biology2024

Microbial Metagenomes Across a Complete Phytoplankton Bloom Cycle: High-Resolution Sampling Every 4 Hours Over 22 Days.

Brook L Nunn, Emma Timmins-Schiffman, Miranda C Mudge, Deanna Plubell, Gabriella Chebli, Julia Kubanek, Michael Riffle, William S Noble, Elizabeth Harvey, Tasman A Nunn and 15 more

Abstract readPreprint
PubMed Full text at PMC Publisher
In one paragraph

Article in bioRxiv : the preprint server for biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

25 authors.

Brook L NunnUniversity of Washington, Department of Genome Sciences, Seattle, WA 98195.ORCID 0000-0002-7361-4359
Emma Timmins-SchiffmanUniversity of Washington, Department of Genome Sciences, Seattle, WA 98195.ORCID 0000-0002-2478-6541
Miranda C MudgeUniversity of Washington, Department of Genome Sciences, Seattle, WA 98195.ORCID 0000-0003-3769-5937
Deanna PlubellUniversity of Washington, Department of Genome Sciences, Seattle, WA 98195.ORCID 0000-0002-6580-8073
Gabriella ChebliGeorgia Institute of Technology, School of Biological Sciences and School of Chemistry & Biochemistry, Parker H. Petit Institute for Bioengineering and Bioscience, Atlanta, GA 30332.ORCID 0000-0002-4533-7470
Julia KubanekGeorgia Institute of Technology, School of Biological Sciences and School of Chemistry & Biochemistry, Parker H. Petit Institute for Bioengineering and Bioscience, Atlanta, GA 30332.ORCID 0000-0003-4482-1831
Michael RiffleUniversity of Washington, Department of Genome Sciences, Seattle, WA 98195.ORCID 0000-0003-1633-8607
William S NobleUniversity of Washington, Department of Genome Sciences, Seattle, WA 98195.ORCID 0000-0001-7283-4715
Elizabeth HarveyDepartment of Biological Sciences, University of New Hampshire, Durham, NH 03824.ORCID 0000-0002-3518-0035
Tasman A NunnUniversity of Washington, Department of Genome Sciences, Seattle, WA 98195.ORCID 0009-0004-1089-9395
Marcel HuntemannDOE Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.
Alicia ClumDOE Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.
Brian FosterDOE Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.
Bryce FosterDOE Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.
Simon RouxDOE Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.
Krishnaveni PalaniappanDOE Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.
Supratim MukherjeeDOE Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.
T B K ReddyDOE Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.
Chris DaumDOE Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.
Alex CopelandDOE Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.
I-Min A ChenDOE Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.
Natalia N IvanovaDOE Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.
Nikos C KyrpidesDOE Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.
Tijana Glavina Del RioDOE Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.
Emiley A Eloe-FadroshDOE Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.ORCID 0000-0002-8162-1276

Funding

Using microbiomes as microsensors to forecast toxic algae bloomsR21ES034337 · NIEHS · UNIVERSITY OF WASHINGTON · PI NUNN, BROOK LEANNE · 2022 to 2023
$443k
NIEHS NIH HHS R21 ES034337
6 · The paper itself

Abstract

In May and June of 2021, marine microbial samples were collected for DNA sequencing in East Sound, WA, USA every 4 hours for 22 days. This high temporal resolution sampling effort captured the last 3 days of a

Identifiers

PMID39386737
PMCPMC11463347

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.