Evidence map›Paper›PMID 39386673›Full record

ArticlebioRxiv : the preprint server for biology2024

Super-enhancer profiling reveals ThPOK/ZBTB7B, a CD4

Camila D Arcuschin, Kamin Kahrizi, Rosalyn W Sayaman, Carolina DiBenedetto, Yizhuo Shen, Pedro J Salaberry, Ons Zakroui, Cecilia Schwarzer, Alessandro Scapozza, Paola Betancur and 7 more

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

17 authors.

Camila D Arcuschin
Kamin Kahrizi
Rosalyn W SayamanORCID 0000-0003-1343-0619
Carolina DiBenedetto
Pedro J Salaberry
Ons Zakroui
Cecilia Schwarzer
Alessandro ScapozzaORCID 0009-0000-2232-6974
Jean-Philippe CoppéORCID 0000-0002-0890-8326
Mary-Helen Barcellos-HoffORCID 0000-0002-5994-9558
Laura van 't VeerORCID 0000-0002-9838-8298

Funding

Cancer Metabolism Training ProgramT32CA221709 · NCI · BECKMAN RESEARCH INSTITUTE/CITY OF HOPE · PI David K. Ann, Victoria L. Seewaldt · 2018 to 2026
$1.8M
A systems biology approach to elucidate the biology of immune-associated outcomes in breast cancerK01CA279498 · NCI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI Rosalyn Wong Sayaman · 2023 to 2026
$696k
NCI NIH HHS K01 CA279498NCI NIH HHS T32 CA221709
6 · The paper itself

Abstract

Despite efforts to understand breast cancer biology, metastatic disease remains a clinical challenge. Identifying suppressors of breast cancer progression and mechanisms of transition to more invasive phenotypes could provide game changing therapeutic opportunities. Transcriptional deregulation is central to all malignancies, highlighted by the extensive reprogramming of regulatory elements that underlie oncogenic programs. Among these, super-enhancers (SEs) stand out due to their enrichment in genes controlling cancer hallmarks. To reveal novel breast cancer dependencies, we integrated the analysis of the SE landscape with master regulator activity inference for a series of breast cancer cell lines. As a result, we identified

Identifiers

PMID39386673
PMCPMC11463473

What OpenQuestion holds

Textmetadata
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.