Evidence map›Paper›PMID 39385019›Full record

ArticleNature materials2024

Jamming of nephron-forming niches in the developing mouse kidney creates cyclical mechanical stresses.

Louis S Prahl, Jiageng Liu, John M Viola, Aria Zheyuan Huang, Trevor J Chan, Gabriela Hayward-Lara, Catherine M Porter, Chenjun Shi, Jitao Zhang, Alex J Hughes

Abstract read
In one paragraph

Article in Nature materials, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed.

  1. Review
  2. Extracellular matrix chemistry tunes bacterial biofilm metabolism and optimizes fitness.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  3. Article
  4. Article
  5. Measurement of adhesion and traction of cells at high yield reveals an energetic ratchet operating during nephron condensation.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Harnessing mechanobiology for kidney organoid research.Frontiers in cell and developmental biology · 2023
    Review
  11. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Louis S Prahl *Department of Bioengineering, University of Pennsylvania, Philadelphia, PA, USA.ORCID 0000-0002-7811-6041
Jiageng Liu *Department of Bioengineering, University of Pennsylvania, Philadelphia, PA, USA.ORCID 0000-0002-7936-3669
John M Viola *Department of Bioengineering, University of Pennsylvania, Philadelphia, PA, USA.
Aria Zheyuan HuangDepartment of Bioengineering, University of Pennsylvania, Philadelphia, PA, USA.
Trevor J ChanDepartment of Bioengineering, University of Pennsylvania, Philadelphia, PA, USA.ORCID 0000-0003-2327-5050
Gabriela Hayward-LaraCell and Molecular Biology Graduate Group, University of Pennsylvania, Philadelphia, PA, USA.ORCID 0000-0002-7847-907X
Catherine M PorterDepartment of Bioengineering, University of Pennsylvania, Philadelphia, PA, USA.
Chenjun ShiDepartment of Biomedical Engineering, Wayne State University, Detroit, MI, USA.
Jitao ZhangDepartment of Biomedical Engineering, Wayne State University, Detroit, MI, USA.ORCID 0000-0002-6240-0371
Alex J HughesDepartment of Bioengineering, University of Pennsylvania, Philadelphia, PA, USA. ajhughes@seas.upenn.edu.ORCID 0000-0001-6801-3455

Funding

TRANSGENIC AND CHIMERIC MOUSE COREP30DK050306 · NIDDK · UNIVERSITY OF PENNSYLVANIA · PI GARY D. WU · 1997 to 2026
$32.5M
Graduate Training in Developmental BiologyT32HD083185 · NICHD · UNIVERSITY OF PENNSYLVANIA · PI Michael Granato, Foteini Mourkioti · 2015 to 2026
$4.0M
A developmental engineering toolbox for large-scale tissue engineeringR35GM133380 · NIGMS · UNIVERSITY OF PENNSYLVANIA · PI Alex Hughes · 2019 to 2026
$3.3M
Engineering induction and assembly of human kidney tissueR01DK132296 · NIDDK · UNIVERSITY OF PENNSYLVANIA · PI HUGHES, ALEX · 2022 to 2025
$1.8M
Optically mapping tissue biomechanics during neural tube closureK25HD097288 · NICHD · WAYNE STATE UNIVERSITY · PI ZHANG, JITAO · 2019 to 2023
$562k
Rapid non-invasive biomechanical imaging of neural crest cell migration in vivoR21HD112663 · NICHD · WAYNE STATE UNIVERSITY · PI ZHANG, JITAO · 2023 to 2023
$330k
Synthetic approaches to study cell polarity related kidney defectsF32DK126385 · NIDDK · UNIVERSITY OF PENNSYLVANIA · PI PRAHL, LOUIS SKJEI · 2020 to 2023
$209k
Fifth International Conference on Self-Healing MaterialsR13EB020472 · NIBIB · DUKE UNIVERSITY · PI REICHERT, WILLIAM MONTGOMERY · 2015 to 2015
$10k
National Science Foundation (NSF) 2339278NICHD NIH HHS K25 HD097288NICHD NIH HHS R21 HD112663NICHD NIH HHS T32 HD083185NIDDK NIH HHS F32 DK126385NIDDK NIH HHS P30 DK050306NIDDK NIH HHS R01 DK132296NIGMS NIH HHS R35 GM133380
6 · The paper itself

Abstract

Urinary collecting tubules form during kidney embryogenesis through the branching of the ureteric bud epithelium. A travelling mesenchyme niche of nephron progenitor cells caps each branching ureteric bud tip. These 'tip domain' niches pack more closely over developmental time and their number relates to nephron endowment at birth. Yet, how the crowded tissue environment impacts niche number and cell decision-making remains unclear. Here, through experiments and mathematical modelling, we show that niche packing conforms to physical limitations imposed by kidney curvature. We relate packing geometries to rigidity theory to predict a stiffening transition starting at embryonic day 15 in the mouse, validated by micromechanical analysis. Using a method to estimate tip domain 'ages' relative to their most recent branch events, we find that new niches overcome mechanical resistance as they branch and displace neighbours. This creates rhythmic mechanical stress in the niche. These findings expand our understanding of kidney development and inform engineering strategies for synthetic regenerative tissues.

Indexed as

NephronsStress, MechanicalAnimalsKidneyMiceModels, Biological

Identifiers

PMID39385019
PMCPMC11841712

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.