Evidence map›Paper›PMID 39384756›Full record

ArticleNature communications2024

Mycobacterial HelD connects RNA polymerase recycling with transcription initiation.

Tomáš Kovaľ, Nabajyoti Borah, Petra Sudzinová, Barbora Brezovská, Hana Šanderová, Viola Vaňková Hausnerová, Alena Křenková, Martin Hubálek, Mária Trundová, Kristýna Adámková and 6 more

Abstract read
In one paragraph

Article in Nature communications, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors.

Tomáš Kovaľ *Institute of Biotechnology of the Czech Academy of Sciences, Průmyslová 595, 252 50, Vestec, Czech Republic.ORCID 0000-0002-2836-3765
Nabajyoti Borah *Institute of Microbiology of the Czech Academy of Sciences, Vídeňská 1083, 142 20, Prague, Czech Republic.
Petra SudzinováInstitute of Microbiology of the Czech Academy of Sciences, Vídeňská 1083, 142 20, Prague, Czech Republic.ORCID 0000-0003-1005-1998
Barbora BrezovskáInstitute of Microbiology of the Czech Academy of Sciences, Vídeňská 1083, 142 20, Prague, Czech Republic.
Hana ŠanderováInstitute of Microbiology of the Czech Academy of Sciences, Vídeňská 1083, 142 20, Prague, Czech Republic.ORCID 0000-0002-5436-7583
Viola Vaňková HausnerováInstitute of Microbiology of the Czech Academy of Sciences, Vídeňská 1083, 142 20, Prague, Czech Republic.
Alena KřenkováInstitute of Organic Chemistry and Biochemistry of the Czech Academy of Sciences, Flemingovo náměstí 542/2, 160 00, Prague, Czech Republic.
Martin HubálekInstitute of Organic Chemistry and Biochemistry of the Czech Academy of Sciences, Flemingovo náměstí 542/2, 160 00, Prague, Czech Republic.
Mária TrundováInstitute of Biotechnology of the Czech Academy of Sciences, Průmyslová 595, 252 50, Vestec, Czech Republic.
Kristýna AdámkováInstitute of Biotechnology of the Czech Academy of Sciences, Průmyslová 595, 252 50, Vestec, Czech Republic.
Jarmila DuškováInstitute of Biotechnology of the Czech Academy of Sciences, Průmyslová 595, 252 50, Vestec, Czech Republic.
Marek SchwarzInstitute of Microbiology of the Czech Academy of Sciences, Vídeňská 1083, 142 20, Prague, Czech Republic.ORCID 0000-0002-3300-6260
Jana WiedermannováInstitute of Microbiology of the Czech Academy of Sciences, Vídeňská 1083, 142 20, Prague, Czech Republic.ORCID 0000-0002-9979-0799
Jan DohnálekInstitute of Biotechnology of the Czech Academy of Sciences, Průmyslová 595, 252 50, Vestec, Czech Republic. Jan.Dohnalek@ibt.cas.cz.
Libor KrásnýInstitute of Microbiology of the Czech Academy of Sciences, Vídeňská 1083, 142 20, Prague, Czech Republic. krasny@biomed.cas.cz.ORCID 0000-0002-4120-4347
Tomáš KoubaInstitute of Organic Chemistry and Biochemistry of the Czech Academy of Sciences, Flemingovo náměstí 542/2, 160 00, Prague, Czech Republic. tomas.kouba@uochb.cas.cz.ORCID 0000-0001-8173-6930

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Mycobacterial HelD is a transcription factor that recycles stalled RNAP by dissociating it from nucleic acids and, if present, from the antibiotic rifampicin. The rescued RNAP, however, must disengage from HelD to participate in subsequent rounds of transcription. The mechanism of release is unknown. We show that HelD from Mycobacterium smegmatis forms a complex with RNAP associated with the primary sigma factor σ

Indexed as

Bacterial ProteinsDNA-Directed RNA PolymerasesMycobacterium smegmatisPromoter Regions, GeneticRifampinSigma FactorTranscription Initiation, GeneticAdenosine TriphosphateGene Expression Regulation, BacterialProtein BindingTranscription FactorsTranscription, GeneticAdenosine TriphosphateBacterial ProteinsDNA-Directed RNA PolymerasesRifampinSigma FactorTranscription Factors

Identifiers

PMID39384756
PMCPMC11464796

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.