Evidence map›Paper›PMID 39384642›Full record

ArticleTropical animal health and production2024

Genome-wide diversity, linkage disequilibrium, and admixture in the main Colombian Creole pig breeds.

Ricardo José Ocampo-Gallego, Yolanda Gómez Vargas, Juan Carlos Rincón Flórez

Abstract read
In one paragraph

Article in Tropical animal health and production, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Ricardo José Ocampo-GallegoCorporación Colombiana de Investigación Agropecuaria - Agrosavia. Nus Research Center, Corregimiento San José del Nus, San Roque, CP. 250047, Antioquia, Colombia. rocampo@agrosavia.co.ORCID http://orcid.org/0000-0001-5704-7844
Yolanda Gómez VargasCorporación Colombiana de Investigación Agropecuaria - Agrosavia. Nus Research Center, Corregimiento San José del Nus, San Roque, CP. 250047, Antioquia, Colombia.ORCID http://orcid.org/0000-0003-4819-1515
Juan Carlos Rincón FlórezPalmira Zoogenetic Resources Research Group, Deparment of Animal Science, Universidad Nacional de Colombia, Palmira, Valle del Cauca, Colombia.ORCID http://orcid.org/0000-0002-6769-6407

Funding

Corporación Colombiana de Investigación Agropecuaria, AGROSAVIA Corporación Colombiana de Investigación Agropecuaria, AGROSAVIA
6 · The paper itself

Abstract

Colombian Creole pigs have adapted to tropical conditions for over 500 years. They have been modified by natural and artificial selection in different regions. At present, the diversity and current introgression status are unknown. The objective was to estimate the genomic diversity, linkage disequilibrium, population structure, and admixture of four Colombian pig breeds and their relationship with other breeds worldwide. Three Colombian pig breeds (SPE-San Pedreño, 11 samples; ZUN-Zungo, 11 samples; CM-Casco de Mula, ten samples) from the conservation nucleus and one biotype not recognized as a breed (CCH-Criollo Chocoano, seven samples) were genotyped using the Illumina GGP-Porcine80K chip. Open-access data from seven international breeds were also included. Colombian Creole pigs showed moderate genetic differentiation (F

Indexed as

Genetic VariationLinkage DisequilibriumSus scrofaAnimalsBreedingColombiaGenomeGenotypePolymorphism, Single NucleotideAmerican swineAnimal genetic resourcesIndigenous pigsPopulation structureSouth American pigs

Identifiers

PMID39384642
PMCPMC11464582

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.