Evidence map›Paper›PMID 39384181›Full record

ArticleJournal of cellular and molecular medicine2024

Molecular characterization and biomarker identification in paediatric B-cell acute lymphoblastic leukaemia.

Yu Du, Xiankai Zhang, Ming Sun, Li Yang, Fei Long, Shanshan Qi, Linlin Luo, Xiaoyan Lv, Chenxuan Wang, Xiaoying Wu and 3 more

Abstract read
In one paragraph

Article in Journal of cellular and molecular medicine, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Review
  2. Review
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Yu DuDepartment of Hematology, Wuhan Children's Hospital, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, Hubei, China.ORCID 0009-0009-5523-5222
Xiankai ZhangPrecision Medical Center, Wuhan Children's Hospital, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, Hubei, China.
Ming SunPediatric Hematological Tumor Disease Laboratory, Wuhan Children's Hospital, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, Hubei, China.
Li YangPediatric Hematological Tumor Disease Laboratory, Wuhan Children's Hospital, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, Hubei, China.
Fei LongPediatric Hematological Tumor Disease Laboratory, Wuhan Children's Hospital, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, Hubei, China.
Shanshan QiPediatric Hematological Tumor Disease Laboratory, Wuhan Children's Hospital, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, Hubei, China.
Linlin LuoDepartment of Hematology, Wuhan Children's Hospital, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, Hubei, China.
Xiaoyan LvDepartment of Hematology, Wuhan Children's Hospital, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, Hubei, China.
Chenxuan WangNanjing Geneseeq Technology Inc, Nanjing, Jiangsu, China.
Xiaoying WuNanjing Geneseeq Technology Inc, Nanjing, Jiangsu, China.
Liuqing ZhuNanjing Geneseeq Technology Inc, Nanjing, Jiangsu, China.
Qiuxiang OuNanjing Geneseeq Technology Inc, Nanjing, Jiangsu, China.
Hao XiongDepartment of Hematology, Wuhan Children's Hospital, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, Hubei, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

B-cell acute lymphoblastic leukaemia (B-ALL) is the most prevalent hematologic malignancy in children and a leading cause of mortality. Managing B-ALL remains challenging due to its heterogeneity and relapse risk. This study aimed to delineate the molecular features of paediatric B-ALL and explore the clinical utility of circulating tumour DNA (ctDNA). We analysed 146 patients with paediatric B-ALL who received systemic chemotherapy. The mutational landscape was profiled in bone marrow (BM) and plasma samples using next-generation sequencing. Minimal residual disease (MRD) testing on day 19 of induction therapy evaluated treatment efficacy. RNA sequencing identified gene fusions in 61% of patients, including 37 novel fusions. Specifically, the KMT2A-TRIM29 novel fusion was validated in a boy who responded well to initial therapy but relapsed after 1 year. Elevated mutation counts and maximum variant allele frequency in baseline BM were associated with significantly poorer chemotherapy response (p = 0.0012 and 0.028, respectively). MRD-negative patients exhibited upregulation of immune-related pathways (p < 0.01) and increased CD8

Indexed as

Biomarkers, TumorMutationNeoplasm, ResidualPrecursor B-Cell Lymphoblastic Leukemia-LymphomaAdolescentBone MarrowChildChild, PreschoolCirculating Tumor DNAFemaleHigh-Throughput Nucleotide SequencingHistone-Lysine N-MethyltransferaseHumansInfantMaleMyeloid-Lymphoid Leukemia ProteinBiomarkers, TumorCirculating Tumor DNAHistone-Lysine N-MethyltransferaseKMT2A protein, humanMyeloid-Lymphoid Leukemia ProteinctDNAimmune microenvironmentnext‐generation sequencingpaediatric B‐cell acute lymphoblastic leukaemiapredictive biomarker

Identifiers

PMID39384181
PMCPMC11464031

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.