Evidence map›Paper›PMID 39383255›Full record

ArticleThe Plant cell2024

OsKANADI1 and OsYABBY5 regulate rice plant height by targeting GIBERELLIN 2-OXIDASE6.

Qi He, Hao Wu, Longjun Zeng, Caiyun Yin, Li Wang, Yiqing Tan, Wanqing Lv, Zhiqiang Liao, Xuelian Zheng, Shuting Zhang and 5 more

Abstract read
In one paragraph

Article in The Plant cell, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Functional Characterization ofPlants (Basel, Switzerland) · 2026
    Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Genome-Wide Identification of theInternational journal of molecular sciences · 2025
    Article
  10. Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Qi HeShenzhen Branch, Guangdong Laboratory of Lingnan Modern Agriculture, Genome Analysis Laboratory of the Ministry of Agriculture and Rural Affairs, Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences, Shenzhen 518120, China.ORCID 0009-0003-8093-9455
Hao WuChongqing Key Laboratory of Plant Resource Conservation and Germplasm Innovation, Integrative Science Center of Germplasm Creation in Western China (Chongqing) Science City, School of Life Sciences, Southwest University, Chongqing 400715, China.ORCID 0000-0002-6752-7160
Longjun ZengInstitute of Crop Sciences, Yichun Academy of Science, Yichun 336000, China.ORCID 0000-0002-1355-4761
Caiyun YinShenzhen Branch, Guangdong Laboratory of Lingnan Modern Agriculture, Genome Analysis Laboratory of the Ministry of Agriculture and Rural Affairs, Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences, Shenzhen 518120, China.ORCID 0000-0001-9121-4212
Li WangInstitute of Cotton Research, Chinese Academy of Agricultural Sciences, Anyang 455000, China.ORCID 0000-0001-7434-9385
Yiqing TanAcademy for Advanced Interdisciplinary Studies, Plant Phenomics Research Center, Nanjing Agricultural University, Nanjing 210095, China.ORCID 0000-0001-8537-1182
Wanqing LvAcademy for Advanced Interdisciplinary Studies, Plant Phenomics Research Center, Nanjing Agricultural University, Nanjing 210095, China.ORCID 0009-0005-7577-1453
Zhiqiang LiaoInstitute of Crop Sciences, Yichun Academy of Science, Yichun 336000, China.ORCID 0009-0001-3100-9687
Xuelian ZhengDepartment of Biotechnology, School of Life Sciences and Technology, Center of Informational Biology, University of Electronic Science and Technology of China, Chengdu 611731, China.ORCID 0000-0002-7475-7888
Shuting ZhangDepartment of Biotechnology, School of Life Sciences and Technology, Center of Informational Biology, University of Electronic Science and Technology of China, Chengdu 611731, China.ORCID 0009-0005-2495-6407
Qinqin HanDepartment of Biotechnology, School of Life Sciences and Technology, Center of Informational Biology, University of Electronic Science and Technology of China, Chengdu 611731, China.ORCID 0009-0001-8316-7839
Danning WangDepartment of Biotechnology, School of Life Sciences and Technology, Center of Informational Biology, University of Electronic Science and Technology of China, Chengdu 611731, China.ORCID 0009-0007-1354-8015
Yong ZhangChongqing Key Laboratory of Plant Resource Conservation and Germplasm Innovation, Integrative Science Center of Germplasm Creation in Western China (Chongqing) Science City, School of Life Sciences, Southwest University, Chongqing 400715, China.ORCID 0000-0003-3704-4835
Guosheng XiongAcademy for Advanced Interdisciplinary Studies, Plant Phenomics Research Center, Nanjing Agricultural University, Nanjing 210095, China.ORCID 0000-0002-4312-1676
Quan WangShenzhen Branch, Guangdong Laboratory of Lingnan Modern Agriculture, Genome Analysis Laboratory of the Ministry of Agriculture and Rural Affairs, Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences, Shenzhen 518120, China.ORCID 0000-0003-2912-1263

Funding

China Postdoctoral Science Foundation 2018M641555Guangdong Basic and Applied Basic Research Foundation 2020B1515120086Innovation Program of CAAS CAAS-CSIAF-202303Key-Area Research and Development Program of Guangdong Province 2021B0707010006National Key R&D Program 2020YFE0202300National Natural Science Foundation of China 32300313
6 · The paper itself

Abstract

Plant height is an important agronomic characteristic of rice (Oryza sativa L.). Map-based cloning analyses of a natural semi-dwarf rice mutant with inwardly curled leaves found in the field revealed that the defects were due to a mutation of a SHAQKYF-class MYB family transcription factor, OsKANADI1 (OsKAN1). OsKAN1 directly bound to the OsYABBY5 (OsYAB5) promoter to repress its expression and interacted with OsYAB5 to form a functional OsKAN1-OsYAB5 complex. GIBERELLIN 2-OXIDASE6 (OsGA2ox6), encoding an enzyme in the gibberellin (GA) catabolic pathway, was activated by OsYAB5. Furthermore, the OsKAN1-OsYAB5 complex suppressed the inhibitory effect of OsKAN1 toward OsYAB5 and inhibited OsYAB5-induced OsGA2ox6 expression. The proOsKAN1:OsYAB5 transgenic plants were taller than wild-type plants, whereas oskan1 proOsKAN1:OsYAB5 plants exhibited a severe dwarf phenotype due to the absence of the OsKAN1-OsYAB5 complex. The OsKAN1-OsYAB5 complex modulated OsGA2ox6 expression, thereby regulating the levels of bioactive gibberellins and, consequently, plant height. This study elucidated the mechanism underlying the effect of the OsKAN1-OsYAB5-OsGA2ox6 regulatory pathway on plant height at different positions in rice stems and provided insights on stem development and candidate genes for the aerial architecture improvement of crop plants.

Indexed as

Gene Expression Regulation, PlantGibberellinsOryzaPlant ProteinsPlants, Genetically ModifiedMixed Function OxygenasesMutationPromoter Regions, GeneticTranscription FactorsGibberellinsMixed Function OxygenasesPlant ProteinsTranscription Factors

Identifiers

PMID39383255
PMCPMC11663581

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.