Evidence map›Paper›PMID 39382543›Full record

ArticleJournal of experimental botany2025

Multi-scale phenotyping of senescence-related changes in roots of rapeseed in response to nitrate limitation.

Maxence James, Céline Masclaux-Daubresse, Thierry Balliau, Anne Marmagne, Fabien Chardon, Jacques Trouverie, Philippe Etienne

Abstract read
In one paragraph

Article in Journal of experimental botany, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Review
  2. Review
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Maxence JamesUniversité de Caen Normandie, INRAE, UMR 950 EVA, SFR Normandie Végétal (FED4277), 14000 Caen, France.ORCID 0000-0002-7670-6638
Céline Masclaux-DaubresseUniversité Paris-Saclay, INRAE, AgroParisTech, Institute Jean-Pierre Bourgin for Plant Sciences (IJPB), 78000, Versailles, France.ORCID 0000-0003-0719-9350
Thierry BalliauUniversité Paris-Saclay, INRAE, CNRS, AgroParisTech, UMR GQE-Le Moulon, 91190 Gif-sur-Yvette, France.ORCID 0000-0002-8172-1605
Anne MarmagneUniversité Paris-Saclay, INRAE, AgroParisTech, Institute Jean-Pierre Bourgin for Plant Sciences (IJPB), 78000, Versailles, France.ORCID 0000-0003-3466-9477
Fabien ChardonUniversité Paris-Saclay, INRAE, AgroParisTech, Institute Jean-Pierre Bourgin for Plant Sciences (IJPB), 78000, Versailles, France.ORCID 0000-0001-7909-3884
Jacques TrouverieUniversité de Caen Normandie, INRAE, UMR 950 EVA, SFR Normandie Végétal (FED4277), 14000 Caen, France.ORCID 0000-0002-1450-896X
Philippe EtienneUniversité de Caen Normandie, INRAE, UMR 950 EVA, SFR Normandie Végétal (FED4277), 14000 Caen, France.ORCID 0000-0002-4531-3874

Funding

French National Research Agency ANR-19-CE14-0009-02Saclay Plant Sciences-SPS ANR-17-EUR-0007
6 · The paper itself

Abstract

Root senescence remains largely unexplored. In this study, the time-course of the morphological, metabolic, and proteomic changes occurring with root aging were investigated, providing a comprehensive picture of the root senescence program. We found novel senescence-related markers for the characterization of the developmental stage of root tissues. The rapeseed root system is unique in that it consists of the taproot and lateral roots. Our study confirmed that the taproot, which transiently accumulates large quantities of starch and proteins, is specifically dedicated to nutrient storage and remobilization, while the lateral roots are mainly dedicated to nutrient uptake. Proteomic data from the taproot and lateral roots highlighted the different senescence-related events that control nutrient remobilization and nutrient uptake capacities. Both the proteome and enzyme activities revealed senescence-induced proteases and nucleotide catabolic enzymes that deserve attention as they may play important roles in nutrient remobilization efficiency in rapeseed roots. Taking advantage of publicly available transcriptomic and proteomic data on senescent Arabidopsis leaves, we provide a novel lists of senescence-related proteins specific or common to root organs and/or leaves.

Indexed as

NitratesPlant ProteinsPlant RootsBrassica napusBrassica rapaGene Expression Regulation, PlantPhenotypePlant SenescenceProteomeProteomicsNitratesPlant ProteinsProteomeCarbonironlateral rootsnitrogenproteasesrapeseedroot senescencetaproot

Identifiers

PMID39382543
PMCPMC11714756

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.