Evidence map›Paper›PMID 39382421›Full record

ArticleThe Indian journal of medical research2024

Clinical implications of activation of the LIMD1-VHL-HIF1α pathway during head-&-neck squamous cell carcinoma development.

Debalina Mukhopadhyay, Balarko Chakraborty, Shreya Sarkar, Neyaz Alam, Chinmay Kumar Panda

Abstract read
In one paragraph

Article in The Indian journal of medical research, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Debalina MukhopadhyayDepartment of Oncogene Regulation, Chittaranjan National Cancer Institute, Kolkata, West Bengal, India.
Balarko ChakrabortyDepartment of Oncogene Regulation, Chittaranjan National Cancer Institute, Kolkata, West Bengal, India.
Shreya SarkarDepartment of Oncogene Regulation, Chittaranjan National Cancer Institute, Kolkata, West Bengal, India.
Neyaz AlamDepartment of Surgical Oncology, Chittaranjan National Cancer Institute, Kolkata, West Bengal, India.
Chinmay Kumar PandaDepartment of Oncogene Regulation, Chittaranjan National Cancer Institute, Kolkata, West Bengal, India.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background & objectives Given the importance of the role of hypoxia induced pathway in different cancers including head-and-neck squamous cell carcinoma (HNSCC), this study delved into elucidating the molecular mechanism of hypoxia-inducible factor-1α (HIF1α) activation in HNSCC. Additionally, it analyzes the alterations of its regulatory genes [von Hippel-Lindau (VHL) and LIM domain containing 1 (LIMD1)] and target gene vascular endothelial growth factor (VEGF) in head-and-neck lesions at different clinical stages in relation with human papillomavirus (HPV) infection. Methods Global mRNA expression profiles of HIF1α, VHL, LIMD1 and VEGF were evaluated from public datasets of HNSCC, followed by validation of their expression (mRNA/protein) in an independent set of HPV+ve/-ve HNSCC samples of different clinical stages. Results A diverse expression pattern of the HIF1α pathway genes was observed, irrespective of HPV infection, in the datasets. In validation in an independent set of HNSCC samples, high mRNA expressions of HIF1α/VEGF were observed particularly in HPV positive samples. However, VHL/LIMD1 mRNA expression was low in tumours regardless of HPV infection status. In immunohistochemical analysis, high/medium (H/M) expression of HIF1α/VEGF was observed in basal/parabasal layers of normal epithelium, with significantly higher expression in tumours, especially in HPV-positive samples. Conversely, high cytoplasmic VHL expression in these layers gradually decreased with the progression of HNSCC, regardless of HPV infection. A similar trend was noted in LIMD1 expression (nuclear/cytoplasmic) during the disease development. The methylation pattern of VHL and LIMD1 promoters in the basal/parabasal layers of normal epithelium correlated with their expression, exhibiting a gradual increase with the progression of HNSCC. The H/M expression of HIF1α/VEGF proteins and reduced VHL expression was associated with poor clinical outcomes. Interpretation & conclusions The results of this study showed differential regulation of the LIMD1-VHL-HIF1α pathway in HPV positive and negative HNSCC samples, illustrating the molecular distinctiveness of these two groups.

Indexed as

Gene Expression Regulation, NeoplasticHypoxia-Inducible Factor 1, alpha SubunitLIM Domain ProteinsPapillomavirus InfectionsSquamous Cell Carcinoma of Head and NeckVascular Endothelial Growth Factor AVon Hippel-Lindau Tumor Suppressor ProteinFemaleHead and Neck NeoplasmsHumansIntracellular Signaling Peptides and ProteinsMaleMiddle AgedSignal TransductionHIF1A protein, humanHypoxia-Inducible Factor 1, alpha SubunitIntracellular Signaling Peptides and ProteinsLIMD1 protein, humanLIM Domain ProteinsVascular Endothelial Growth Factor AVEGFA protein, humanVHL protein, humanVon Hippel-Lindau Tumor Suppressor Proteinand-neckBasal/parabasal layersHIF1α regulationHNSCC-headHPVnormal oral epitheliumprognosisSCC-squamous cell carcinoma

Identifiers

PMID39382421
PMCPMC11463245

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.