Evidence map›Paper›PMID 39381079›Full record

ArticleJournal of biomedical optics2024

High-resolution lensless holographic microscopy using a physics-aware deep network.

Ashwini S Galande, Vikas Thapa, Aswathy Vijay, Renu John

Abstract read
In one paragraph

Article in Journal of biomedical optics, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Ashwini S GalandeIndian Institute of Technology Hyderabad, Department of Biomedical Engineering, Medical Optics and Sensors Laboratory, Hyderabad, Telangana, India.ORCID 0000-0001-7318-0004
Vikas ThapaIndian Institute of Technology Hyderabad, Department of Biomedical Engineering, Medical Optics and Sensors Laboratory, Hyderabad, Telangana, India.
Aswathy VijayIndian Institute of Technology Hyderabad, Department of Biomedical Engineering, Medical Optics and Sensors Laboratory, Hyderabad, Telangana, India.ORCID 0000-0001-5861-8709
Renu JohnIndian Institute of Technology Hyderabad, Department of Biomedical Engineering, Medical Optics and Sensors Laboratory, Hyderabad, Telangana, India.ORCID 0000-0003-3254-2472

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Significance: Lensless digital inline holographic microscopy (LDIHM) is an emerging quantitative phase imaging modality that uses advanced computational methods for phase retrieval from the interference pattern. The existing end-to-end deep networks require a large training dataset with sufficient diversity to achieve high-fidelity hologram reconstruction. To mitigate this data requirement problem, physics-aware deep networks integrate the physics of holography in the loss function to reconstruct complex objects without needing prior training. However, the data fidelity term measures the data consistency with a single low-resolution hologram without any external regularization, which results in a low performance on complex biological data. Aim: We aim to mitigate the challenges with trained and physics-aware untrained deep networks separately and combine the benefits of both methods for high-resolution phase recovery from a single low-resolution hologram in LDIHM. Approach: We propose a hybrid deep framework (HDPhysNet) using a plug-and-play method that blends the benefits of trained and untrained deep models for phase recovery in LDIHM. The high-resolution phase is generated by a pre-trained high-definition generative adversarial network (HDGAN) from a single low-resolution hologram. The generated phase is then plugged into the loss function of a physics-aware untrained deep network to regulate the complex object reconstruction process. Results: Simulation results show that the SSIM of the proposed method is increased by 0.07 over the trained and 0.04 over the untrained deep networks. The average phase-SNR is elevated by 8.2 dB over trained deep models and 9.8 dB over untrained deep networks on the experimental biological cells (cervical cells and red blood cells). Conclusions: We showed improved performance of the HDPhysNet against the unknown perturbation in the imaging parameters such as the propagation distance, the wavelength of the illuminating source, and the imaging sample compared with the trained network (HDGAN). LDIHM, combined with HDPhysNet, is a portable and technology-driven microscopy best suited for point-of-care cytology applications.

Indexed as

HolographyImage Processing, Computer-AssistedMicroscopyAlgorithmsDeep LearningHumansNeural Networks, ComputerQuantitative Phase Imagingcervical cellshigh-resolutionlensless holographyphysics-aware neural networks

Identifiers

PMID39381079
PMCPMC11460617

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.