Evidence map›Paper›PMID 39380992›Full record

ArticleFrontiers in immunology2024

Signal peptide exchange alters HIV-1 envelope antigenicity and immunogenicity.

Chitra Upadhyay, Priyanka Rao, Mohammad Amin Behzadi, Roya Feyznezhad, Gregory S Lambert, Rajnish Kumar, Madhu Kumar, Weiming Yang, Xunqing Jiang, Christina C Luo and 6 more

Abstract read
In one paragraph

Article in Frontiers in immunology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Article
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  6. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors.

Chitra UpadhyayDivision of Infectious Diseases, Department of Medicine, Icahn School of Medicine at Mount Sinai, New York, NY, United States.
Priyanka RaoDivision of Infectious Diseases, Department of Medicine, Icahn School of Medicine at Mount Sinai, New York, NY, United States.
Mohammad Amin BehzadiDepartment of Microbiology, Icahn School of Medicine at Mount Sinai, New York, NY, United States.
Roya FeyznezhadDivision of Infectious Diseases, Department of Medicine, Icahn School of Medicine at Mount Sinai, New York, NY, United States.
Gregory S LambertDivision of Infectious Diseases, Department of Medicine, Icahn School of Medicine at Mount Sinai, New York, NY, United States.
Rajnish KumarDivision of Infectious Diseases, Department of Medicine, Icahn School of Medicine at Mount Sinai, New York, NY, United States.
Madhu KumarDepartment of Microbiology, Icahn School of Medicine at Mount Sinai, New York, NY, United States.
Weiming YangDepartment of Pathology, Johns Hopkins University, Baltimore, MD, United States.
Xunqing JiangDepartment of Biochemistry and Molecular Pharmacology, New York University Grossman School of Medicine, New York, NY, United States.
Christina C LuoDepartment of Biochemistry and Molecular Pharmacology, New York University Grossman School of Medicine, New York, NY, United States.
Arthur NadasDepartment of Environment Medicine, New York University Grossman School of Medicine, New York, NY, United States.
James ArthosNational Institute of Allergy and Infectious Diseases, National Institutes of Health, Bethesda, MD, United States.
Xiang-Peng KongDepartment of Biochemistry and Molecular Pharmacology, New York University Grossman School of Medicine, New York, NY, United States.
Hui ZhangDepartment of Pathology, Johns Hopkins University, Baltimore, MD, United States.
Catarina E HioeDivision of Infectious Diseases, Department of Medicine, Icahn School of Medicine at Mount Sinai, New York, NY, United States.
J Andrew DutyDepartment of Microbiology, Icahn School of Medicine at Mount Sinai, New York, NY, United States.

Funding

Structure and immunogenicity of novel trimeric HIV-1 Env immunogensR01AI145655 · NIAID · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI KONG, XIANGPENG · 2019 to 2023
$4.7M
Using immune complex vaccines to optimize antibody responses to HIV EnvR01AI148327 · NIAID · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI HIOE, CATARINA E · 2020 to 2025
$4.5M
Harnessing Abs specific for immunogenic and conserved Env epitopes to protect against HIVR01AI139290 · NIAID · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI HIOE, CATARINA E · 2018 to 2022
$4.1M
Modulating antigenic and immunogenic properties of HIV Env by altering signal sequenceR01AI140909 · NIAID · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI UPADHYAY, CHITRA · 2019 to 2023
$3.3M
Harnessing native glycosylation to improve immunogenicity of HIV-1 Env immunogensR01AI179427 · NIAID · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI Chitra Upadhyay · 2024 to 2026
$2.5M
Role of signal sequence variation in governing HIV Env FunctionsR21AI124863 · NIAID · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI HIOE, CATARINA E, UPADHYAY, CHITRA · 2017 to 2018
$482k
BLR&D Research Career Scientist Award ApplicationIK6BX004607 · VA · JAMES J PETERS VA MEDICAL CENTER · PI HIOE, CATARINA E · 2019 to 2025
–
Vaccine targeting HIV sites of vulnerabilityI01BX005616 · VA · JAMES J PETERS VA MEDICAL CENTER · PI HIOE, CATARINA E · 2022 to 2025
–
BLRD VA I01 BX003860BLRD VA I01 BX005616BLRD VA IK6 BX004607NIAID NIH HHS R01 AI139290NIAID NIH HHS R01 AI140909NIAID NIH HHS R01 AI145655NIAID NIH HHS R01 AI148327NIAID NIH HHS R01 AI179427NIAID NIH HHS R21 AI124863
6 · The paper itself

Abstract

Introduction: HIV-1 envelope (Env) is the key target for antibodies (Abs) against the virus and thus an important HIV-1 vaccine component. Env is synthesized from a gp160 precursor with a signal peptide (SP) at its N-terminus. This study investigated the influence of the SP on Env antigenicity and immunogenicity. Methods: Env proteins from two HIV-1 isolates, AA05 and AC02, were analyzed as gp120 and gp160 in their native wild-type (WT) forms and as chimeras with swapped SPs (AA05-02 and AC02-05). The WT and chimeric Env were assessed for antigenicity and glycosylation using monoclonal antibodies (mAbs) and glycan probes. Immunogenicity was tested in mice using three vaccine types: gp120 protein, gp120 DNA+gp120 protein, and gp120 DNA+gp160 DNA. Results: The recombinant AC02 gp120 protein was antigenically superior to AA05 as indicated by higher reactivity with most mAbs tested. When SPs were swapped, the antigenicity of the chimeric gp120s (AA05-02 and AC02-05) resembled that of the gp120s from which the SPs were derived; AA05-02 was similar to AC02 and vice versa. Glycan probe reactivity followed a similar pattern: AA05-02 and AC02 showed similar affinity to high-mannose specific mAbs and lectins. Interestingly, the antigenicity of gp160s showed an opposite pattern; membrane-bound gp160 expressed with the AA05 SP (AA05 and AC02-05) showed greater mAb binding than gp160 with the AC02 SP (AC02 and AA05-02). Mice immunized with gp120 protein showed that AA05-02 induced stronger cross-reactive binding Ab responses than AA05 WT, and AC02 elicited stronger responses than AC02-05, indicating AC02 SP enhanced gp120 immunogenicity. However, when DNA vaccines were included (gp120 DNA+gp120 protein and gp120 DNA+gp160 DNA), the use of heterologous SPs diminished the immunogenicity of the WT immunogens. Among the three vaccine regimens tested, only gp120 DNA+gp160 DNA immunization elicited low-level Tier 2 neutralizing Abs, with AA05 WT inducing Abs with greater neutralization capabilities than AA05-02. Conclusion: These data demonstrate that the SP can significantly impact the antigenicity and immunogenicity of HIV-1 Env proteins. Hence, while SP swapping is a common practice in constructing Env immunogens, this study highlights the importance of careful consideration of the effects of replacing native SPs on the immunogenicity of Env vaccines.

Indexed as

AIDS VaccinesHIV-1HIV AntibodiesHIV Envelope Protein gp120Protein Sorting SignalsAnimalsAntibodies, MonoclonalAntibodies, NeutralizingFemaleGlycosylationHIV Envelope Protein gp160HIV InfectionsHumansMiceMice, Inbred BALB CAIDS VaccinesAntibodies, MonoclonalAntibodies, Neutralizinggp120 protein, Human immunodeficiency virus 1HIV AntibodiesHIV Envelope Protein gp120HIV Envelope Protein gp160Protein Sorting Signalsantibody-dependent cellular phagocytosisantigenicityglycosylationHIV-1 envelopeHIV-1 vaccineimmunogenicityneutralizationsignal peptide

Identifiers

PMID39380992
PMCPMC11458420

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.