Evidence map›Paper›PMID 39379619›Full record

ArticleAnalytical and bioanalytical chemistry2025

The O-GlcNAc database: introducing new features and tools developed from community feedback.

Florian Malard, Lilyanna Massman, Sébastien Campagne, Stephanie Olivier-Van Stichelen

Abstract read
In one paragraph

Article in Analytical and bioanalytical chemistry, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Review
  2. Review
  3. Article
  4. Mammalian fatty acid synthase andBiochemistry and biophysics reports · 2026
    Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Florian MalardINSERM U1212, CNRS UMR5320, ARNA Laboratory, University of Bordeaux, Bordeaux, France.
Lilyanna MassmanDepartment of Biochemistry, Medical College of Wisconsin, Milwaukee, WI, 53226, USA.
Sébastien CampagneINSERM U1212, CNRS UMR5320, ARNA Laboratory, University of Bordeaux, Bordeaux, France.
Stephanie Olivier-Van StichelenDepartment of Biochemistry, Medical College of Wisconsin, Milwaukee, WI, 53226, USA. solivier@mcw.edu.ORCID http://orcid.org/0000-0002-2033-5241

Funding

Placental Hormones and O-GlcNAcylation in Gestational DiabetesR01HD104808 · NICHD · MEDICAL COLLEGE OF WISCONSIN · PI Stephanie Olivier-Van Stichelen · 2022 to 2026
$1.8M
National Institute of Child Health and Human Development R01HD104808NICHD NIH HHS R01 HD104808
6 · The paper itself

Abstract

O-GlcNAc is a reversible post-translational modification found on serine and threonine residues of nucleocytoplasmic proteins. Four years ago, we released the O-GlcNAc Database ( oglcnac.mcw.edu ), a comprehensive catalog of O-GlcNAcylated proteins that has become one of the most cited resources in the field, with hundreds of unique users per month. We are now presenting an updated O-GlcNAc Database, which includes nearly 20,000 O-GlcNAcylated proteins and 48 species, marking substantial growth in data volume and scope. This paper presents the most noteworthy features implemented over the last year, often originating from feedback from the O-GlcNAc community. Among these features, we provide a brief overview of the database content, introduce our new protein viewer mode, and discuss the implementation of subcellular localization information and its applications in the O-GlcNAc score. We also provide an interface to use CytOVS, a tool designed to evaluate and sort O-GlcNAcome datasets derived from MS experiments. In conclusion, this new and improved O-GlcNAc Database represents a significant advancement in providing a comprehensive and expanded resource for researchers in the field of O-GlcNAc biology.

Indexed as

AcetylglucosamineDatabases, ProteinProteinsHumansProtein Processing, Post-TranslationalAcetylglucosamineProteinsDatabaseMass spectrometryO-GlcNAcSubcellular localization

Identifiers

PMID39379619
PMCPMC12105936

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.