Evidence map›Paper›PMID 39379387›Full record

ArticleScientific reports2024

Key role for inflammation-related signaling in the pathogenesis of myopia based on evidence from proteomics analysis.

Liqin Jiang, James H Z Koh, Sherlyn H Y Seah, Yee Shan Dan, Zhaoran Wang, Xavier Chan, Lei Zhou, Veluchamy Amutha Barathi, Quan V Hoang

Abstract read
In one paragraph

Article in Scientific reports, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
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  6. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Liqin Jiang *Singapore Eye Research Institute, Singapore National Eye Centre, Duke-NUS Medical School, 20 College Rd, Singapore, 169856, Singapore.
James H Z Koh *Singapore Eye Research Institute, Singapore National Eye Centre, Duke-NUS Medical School, 20 College Rd, Singapore, 169856, Singapore.
Sherlyn H Y SeahSingapore Eye Research Institute, Singapore National Eye Centre, Duke-NUS Medical School, 20 College Rd, Singapore, 169856, Singapore.
Yee Shan DanSingapore Eye Research Institute, Singapore National Eye Centre, Duke-NUS Medical School, 20 College Rd, Singapore, 169856, Singapore.
Zhaoran WangSingapore Eye Research Institute, Singapore National Eye Centre, Duke-NUS Medical School, 20 College Rd, Singapore, 169856, Singapore.
Xavier ChanSingapore Eye Research Institute, Singapore National Eye Centre, Duke-NUS Medical School, 20 College Rd, Singapore, 169856, Singapore.
Lei ZhouSchool of Optometry, Department of Applied Biology and Chemical Technology, Research Centre for SHARP Vision (RCSV), The Hong Kong Polytechnic University, Hong Kong, China.
Veluchamy Amutha BarathiSingapore Eye Research Institute, Singapore National Eye Centre, Duke-NUS Medical School, 20 College Rd, Singapore, 169856, Singapore. amutha.b.veluchamy@seri.com.sg.
Quan V HoangSingapore Eye Research Institute, Singapore National Eye Centre, Duke-NUS Medical School, 20 College Rd, Singapore, 169856, Singapore. donny.hoang@duke-nus.edu.sg.

Funding

Hong Kong Polytechnic University grant P0044266Lee Foundation TLF1021-3National Medical Research Council MOH-000531-00SERI-Lee Foundation LF0621-1SERI Lee-Foundation Pilot Grant R1756/79/2020 (LF0620-6)SingHealth Duke-NUS Academic Medicine Research Grant AM-SU048-2020SingHealth Foundation-SNEC R1499/82/2017
6 · The paper itself

Abstract

The mechanisms underlying myopia pathogenesis are not well understood. Using publicly-available human and animal datasets, we expound on the roles of known, implicated proteins, and new myopia-related signaling pathways were hypothesized. Proteins identified from human serum or ocular fluids, and from ocular tissues in myopic animal models, were uploaded and analyzed with the QIAGEN Ingenuity Pathway Analysis (IPA) software (March 2023). With each IPA database update, more potentially-relevant proteins and signaling pathways previously unavailable during data acquisition are added, allowing extraction of novel conclusions from existing data. Canonical pathway analysis was used to analyze these data and calculate an IPA activation z-score-which indicates not only whether an association is significant, but also whether the pathway is likely activated or inhibited. Cellular immune response and cytokine signaling were frequently found to be affected in both human and animal myopia studies. Analysis of two publicly-available proteomic datasets highlighted a potential role of the innate immune system and inflammation in myopia development, detailing specific signaling pathways involved such as Granzyme A (GzmA) and S100 family signaling in the retina, and activation of myofibroblast trans-differentiation in the sclera. This perspective in myopia research may facilitate development of more effective and targeted therapeutic agents.

Indexed as

InflammationMyopiaProteomicsSignal TransductionAnimalsCytokinesDisease Models, AnimalHumansCytokinesInflammationInnate immunityMyopiaProteomicsSignaling pathways

Identifiers

PMID39379387
PMCPMC11461836

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.