Evidence map›Paper›PMID 39378089›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2024

Structural insights into KSHV-GPCR constitutive activation and CXCL1 chemokine recognition.

Aijun Liu, Yezhou Liu, Clàudia Llinàs Del Torrent Masachs, Weijia Zhang, Leonardo Pardo, Richard D Ye

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Article
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  4. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Aijun Liu *Kobilka Institute of Innovative Drug Discovery, School of Medicine, The Chinese University of Hong Kong, Shenzhen, Guangdong 518172, China.
Yezhou Liu *Kobilka Institute of Innovative Drug Discovery, School of Medicine, The Chinese University of Hong Kong, Shenzhen, Guangdong 518172, China.ORCID 0000-0001-7575-8260
Clàudia Llinàs Del Torrent Masachs *Laboratori de Medicina Computacional, Unitat de Bioestadística, Facultat de Medicina, Universitat Autònoma de Barcelona, Bellaterra 08193, Spain.ORCID 0000-0002-6772-6856
Weijia ZhangKobilka Institute of Innovative Drug Discovery, School of Medicine, The Chinese University of Hong Kong, Shenzhen, Guangdong 518172, China.ORCID 0009-0002-6420-5307
Leonardo PardoLaboratori de Medicina Computacional, Unitat de Bioestadística, Facultat de Medicina, Universitat Autònoma de Barcelona, Bellaterra 08193, Spain.ORCID 0000-0003-1778-7420
Richard D YeKobilka Institute of Innovative Drug Discovery, School of Medicine, The Chinese University of Hong Kong, Shenzhen, Guangdong 518172, China.ORCID 0000-0002-2164-5620

Funding

China Postdoctoral Science Foundation (China Postdoctoral Foundation Project) 2022M713049MOST | National Natural Science Foundation of China (NSFC) 32070950Science, Technology and Innovation Commission of Shenzhen Municipality (() GXWD20201231105722002-20200831175432002| Shenzen Municipal and Hong Kong Joint Innovation Project (Shenzhen and Hong Kong Joint Innovation Project) HZQB-KCZYB-2020056Shenzhen Municipal Science and Technology Innovation Council | Shenzhen Science and Technology Innovation Program () RCBS20221008093330067
6 · The paper itself

Abstract

Kaposi's sarcoma-associated herpesvirus (KSHV) encodes a viral G protein-coupled receptor, KSHV-GPCR, that contributes to KSHV immune evasion and pathogenesis of Kaposi's sarcoma. KSHV-GPCR shares a high similarity with CXC chemokine receptors CXCR2 and can be activated by selected chemokine ligands. Like other herpesvirus-encoded GPCRs, KSHV-GPCR is characterized by its constitutive activity by coupling to various G proteins. We investigated the structural basis of ligand-dependent and constitutive activation of KSHV-GPCR, obtaining high-resolution cryo-EM structures of KSHV-GPCR-Gi complexes with and without the bound CXCL1 chemokine. Analysis of the apo-KSHV-GPCR-Gi structure (2.81 Å) unraveled the involvement of extracellular loop 2 in constitutive activation of the receptor. In comparison, the CXCL1-bound KSHV-GPCR-Gi structure (3.01 Å) showed a two-site binding mode and provided detailed information of CXCL1 binding to a chemokine receptor. The dual activation mechanism employed by KSHV-GPCR represents an evolutionary adaptation for immune evasion and contributes to the pathogenesis of Kaposi's sarcoma. Together with results from functional assays that confirmed the structural models, these findings may help to develop therapeutic strategies for KSHV infection.

Indexed as

Chemokine CXCL1Herpesvirus 8, HumanCryoelectron MicroscopyHumansModels, MolecularProtein BindingReceptors, ChemokineReceptors, G-Protein-CoupledSarcoma, KaposiViral ProteinsChemokine CXCL1CXCL1 protein, humanG protein-coupled receptor, Human herpesvirus 8Receptors, ChemokineReceptors, G-Protein-CoupledViral Proteinschemokinecryo-EM structureCXCL1Kaposi’s sarcomaKSHV-GPCR

Identifiers

PMID39378089
PMCPMC11494311

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.