Evidence map›Paper›PMID 39377673›Full record

ArticleThe Analyst2024

Evaluating protocols for reproducible targeted metabolomics by NMR.

Darcy Cochran, Panteleimon G Takis, James L Alexander, Benjamin H Mullish, Nick Powell, Julian R Marchesi, Robert Powers

Abstract read
In one paragraph

Article in The Analyst, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
  2. Review
  3. Review
  4. Review
  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Darcy CochranDepartment of Chemistry, University of Nebraska-Lincoln, Lincoln, Nebraska, 68588-0304, USA.ORCID http://orcid.org/0000-0002-2508-5333
Panteleimon G TakisDepartment of Chemistry, University of Ioannina, Ioannina GR 451 10, Greece. ptakis@uoi.gr.ORCID http://orcid.org/0000-0002-7224-0412
James L AlexanderDepartments of Gastroenterology and Hepatology, St Mary's Hospital, Imperial College Healthcare NHS Trust, South Wharf Road, Paddington London, W2 1NY, UK.
Benjamin H MullishDepartments of Gastroenterology and Hepatology, St Mary's Hospital, Imperial College Healthcare NHS Trust, South Wharf Road, Paddington London, W2 1NY, UK.ORCID http://orcid.org/0000-0001-6300-3100
Nick PowellDepartments of Gastroenterology and Hepatology, St Mary's Hospital, Imperial College Healthcare NHS Trust, South Wharf Road, Paddington London, W2 1NY, UK.
Julian R MarchesiDepartment of Gastroenterology, St Mark's Hospital and Academic Institute, Middlesex, UK.
Robert PowersDepartment of Chemistry, University of Nebraska-Lincoln, Lincoln, Nebraska, 68588-0304, USA.ORCID http://orcid.org/0000-0001-9948-6837

Funding

Targeted mass spectrometry approaches to understand CART processing and recepter interactionsP20GM113126 · NIGMS · UNIVERSITY OF NEBRASKA LINCOLN · PI GUO, JIANTAO · 2016 to 2025
$20.8M
NIGMS NIH HHS P20 GM113126
6 · The paper itself

Abstract

Metabolomics aims to study the downstream effects of variables like diet, environment, or disease on a given biological system. However, inconsistencies in sample preparation, data acquisition/processing protocols lead to reproducibility and accuracy concerns. A systematic study was conducted to assess how sample preparation methods and data analysis platforms affect metabolite susceptibility. A targeted panel of 25 metabolites was evaluated in 69 clinical metabolomics samples prepared following three different protocols: intact, ultrafiltration, and protein precipitation. The resulting metabolic profiles were characterized by 1D

Indexed as

Magnetic Resonance SpectroscopyMetabolomicsHumansReproducibility of ResultsSoftware

Identifiers

PMID39377673
PMCPMC11587611

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.