Evidence map›Paper›PMID 39377584›Full record

ArticlemSystems2024

Protein aggregation is a consequence of the dormancy-inducing membrane toxin TisB in

Florian H Leinberger, Liam Cassidy, Daniel Edelmann, Nicole E Schmid, Markus Oberpaul, Patrick Blumenkamp, Sebastian Schmidt, Ana Natriashvili, Maximilian H Ulbrich, Andreas Tholey and 2 more

Abstract read
In one paragraph

Article in mSystems, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Article
  2. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Florian H LeinbergerInstitute for Microbiology and Molecular Biology, Justus-Liebig-Universität, Giessen, Germany.
Liam CassidySystematic Proteome Research & Bioanalytics, Institute for Experimental Medicine, Christian-Albrechts-Universität, Kiel, Germany.
Daniel EdelmannInstitute for Microbiology and Molecular Biology, Justus-Liebig-Universität, Giessen, Germany.
Nicole E SchmidInstitute for Microbiology and Molecular Biology, Justus-Liebig-Universität, Giessen, Germany.
Markus OberpaulBranch for Bioresources of the Fraunhofer IME, Fraunhofer Institute for Molecular Biology and Applied Ecology IME, Giessen, Germany.
Patrick BlumenkampBioinformatics and Systems Biology, Justus-Liebig-Universität, Giessen, Germany.
Sebastian SchmidtInstitute for Microbiology and Molecular Biology, Justus-Liebig-Universität, Giessen, Germany.
Ana NatriashviliInstitute of Biochemistry and Molecular Biology, ZBMZ, Faculty of Medicine, Albert-Ludwigs-Universität, Freiburg, Germany.
Maximilian H UlbrichInternal Medicine IV, Department of Medicine, University Medical Center, and Faculty of Medicine, Albert-Ludwigs-Universität, Freiburg, Germany.
Andreas TholeySystematic Proteome Research & Bioanalytics, Institute for Experimental Medicine, Christian-Albrechts-Universität, Kiel, Germany.ORCID 0000-0002-8687-6817
Hans-Georg KochInstitute of Biochemistry and Molecular Biology, ZBMZ, Faculty of Medicine, Albert-Ludwigs-Universität, Freiburg, Germany.ORCID 0000-0001-5913-0334
Bork A BerghoffInstitute for Microbiology and Molecular Biology, Justus-Liebig-Universität, Giessen, Germany.ORCID 0000-0002-6299-419X

Funding

Deutsche Forschungsgemeinschaft (DFG) BE 5210/3-1,BE 5210/3-2Deutsche Forschungsgemeinschaft (DFG) KO2184/9.1, KO2184/9.2, SFB1381 (Project ID 403222702)Deutsche Forschungsgemeinschaft (DFG) TH872/10-2Fonds der Chemischen Industrie (FCI) material cost allowance
6 · The paper itself

Abstract

Bacterial dormancy is a valuable strategy to survive stressful conditions. Toxins from chromosomal toxin-antitoxin systems have the potential to halt cell growth, induce dormancy, and eventually promote a stress-tolerant persister state. Due to their potential toxicity when overexpressed, sophisticated expression systems are needed when studying toxin genes. Here, we present a moderate expression system for toxin genes based on an artificial 5' untranslated region. We applied the system to induce expression of the toxin gene IMPORTANCE: Protein aggregates occur in all living cells due to misfolding of proteins. In bacteria, protein aggregation is associated with cellular inactivity, which is related to dormancy and tolerance to stressful conditions, including exposure to antibiotics. In

Indexed as

Bacterial ToxinsEscherichia coliEscherichia coli ProteinsAnti-Bacterial AgentsCiprofloxacinDNA DamageGene Expression Regulation, BacterialProtein AggregatesToxin-Antitoxin SystemsAnti-Bacterial AgentsBacterial ToxinsCiprofloxacinEscherichia coli ProteinsProtein AggregatesTisB toxin, E coliantibioticsdormancyprotein aggregationtoxin-antitoxin systemstype I toxins

Identifiers

PMID39377584
PMCPMC11575346

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.