Evidence map›Paper›PMID 39377583›Full record

ArticlemSystems2024

Expanded genome and proteome reallocation in a novel, robust

David Dooley, Seunghyun Ryu, Richard J Giannone, Jackson Edwards, Bruce S Dien, Patricia J Slininger, Cong T Trinh

Abstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in mSystems, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Sodium ion stress accelerates cell lysis inApplied and environmental microbiology · 2026
    Article
  2. Article
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

David DooleyDepartment of Chemical and Biomolecular Engineering, University of Tennessee Knoxville, Knoxville, Tennessee, USA.ORCID 0000-0001-6793-4463
Seunghyun RyuDepartment of Chemical and Biomolecular Engineering, University of Tennessee Knoxville, Knoxville, Tennessee, USA.ORCID 0000-0003-0089-7922
Richard J GiannoneCenter for Bioenergy Innovation, Oak Ridge, Tennessee, USA.
Jackson EdwardsUnited States Department of Agriculture (USDA), Agricultural Research Service (ARS), National Center for Agricultural Utilization Research (NCAUR), Bioenergy Research Unit, Peoria, Illinois, USA.
Bruce S DienUnited States Department of Agriculture (USDA), Agricultural Research Service (ARS), National Center for Agricultural Utilization Research (NCAUR), Bioenergy Research Unit, Peoria, Illinois, USA.
Patricia J SliningerUnited States Department of Agriculture (USDA), Agricultural Research Service (ARS), National Center for Agricultural Utilization Research (NCAUR), Bioenergy Research Unit, Peoria, Illinois, USA.
Cong T TrinhDepartment of Chemical and Biomolecular Engineering, University of Tennessee Knoxville, Knoxville, Tennessee, USA.ORCID 0000-0002-8362-725X

Funding

Orthocoding for Spatial SequencingR56HG011231 · NHGRI · STANFORD UNIVERSITY · PI FORDYCE, POLLY MORRELL, ROHATGI, RAJAT · 2020 to 2020
$394k
DOE | SC | Center for Bioenergy Innovation (CBI) (DE-AC05-00OR22725)Joint Genome Institute (JGI) DE-AC02-05CH11231U.S. Department of Energy (DOE) DE-SC0022226
6 · The paper itself

Abstract

PubMed holds no abstract for this paper.

Indexed as

Bacillus coagulansGenome, BacterialProteomeBacterial ProteinsHexosesPentosesBacterial ProteinsHexosesPentosesProteomeB-768Bacillus coagulansbiomass hydrolysatescarbohydrate metabolismlactate overproduceroverflow metabolismproteome reallocationrobustnessswitchgrassthermophile

Identifiers

PMID39377583
PMCPMC11575207

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.