Evidence map›Paper›PMID 39375815›Full record

ArticleHereditas2024

The Jan Sjödin faba bean mutant collection: morphological and molecular characterization.

Hamid Khazaei, Ulrika Carlson-Nilsson, Alan H Schulman

Abstract read
In one paragraph

Article in Hereditas, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Hamid KhazaeiProduction systems, Natural Resources Institute Finland, Helsinki, Finland. hamid.khazaei@helsinki.fi.ORCID http://orcid.org/0000-0002-5202-8764
Ulrika Carlson-NilssonNordic Genetic Resource Center, Alnarp, Sweden.ORCID http://orcid.org/0000-0002-6467-2215
Alan H SchulmanProduction systems, Natural Resources Institute Finland, Helsinki, Finland.ORCID http://orcid.org/0000-0002-4126-6177

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundPlant mutagenesis creates novel alleles, thereby increasing genetic and phenotypic diversity. The availability of the faba bean (Vicia faba L.) reference genome and a growing set of additional genomic resources has increased the scientific and practical value of mutant collections. We aimed to genotype and morphologically phenotype a historical faba bean mutant collection developed and characterized by Jan Sjödin (1934-2023) over half a century ago in order to increase its value to researchers. The collection was genotyped using high-throughput single-primer enrichment technology (SPET) assays.

resultsWe used 11,073 informative single nucleotide polymorphism (SNP) markers spanning the faba bean genome to genotype 52 mutant lines along with the background line, cv. Primus. A range of flower, seed, leaf, and stipule mutations were observed. The analysis of population structure revealed a shallow structure with no major subpopulations. Principal component and cluster analyses revealed, to a minor extent, that the mutants clustered by their phenotype.

conclusionsThe mutants' phenotypic variation and shallow structure indicate that the Sjödin faba bean collection has the potential to play a significant role in faba bean breeding and in genetic and functional studies.

Indexed as

GenotypeMutationPhenotypePolymorphism, Single NucleotideVicia fabaGenome, PlantPlant BreedingGenetic diversityMutant genetic resourcesSPET genotypingVicia faba

Identifiers

PMID39375815
PMCPMC11457391

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.