Evidence map›Paper›PMID 39374386›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2024

Tracking the progeny of bacterial persisters using a CRISPR-based genomic recorder.

Julian Anthony Rycroft, Rachel Teresa Giorgio, Molly Sargen, Sophie Helaine

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Julian Anthony RycroftDepartment of Microbiology, Harvard Medical School, Boston, MA 02115.
Rachel Teresa Giorgio *Department of Microbiology, Harvard Medical School, Boston, MA 02115.
Molly Sargen *Department of Microbiology, Harvard Medical School, Boston, MA 02115.ORCID 0000-0003-4916-0577
Sophie HelaineDepartment of Microbiology, Harvard Medical School, Boston, MA 02115.ORCID 0000-0002-9877-4180

Funding

Recording the role of persisters in infection relapseR21AI168524 · NIAID · HARVARD MEDICAL SCHOOL · PI HELAINE, SOPHIE · 2023 to 2024
$466k
The Dynamics of DNA in Salmonella Persisters in MacrophagesF31AI176589 · NIAID · HARVARD MEDICAL SCHOOL · PI SARGEN, MOLLY RENEE · 2023 to 2025
$87k
Aramont Fund NAHHS | NIH (NIH) AI168524NIAID NIH HHS F31 AI176589NIAID NIH HHS R21 AI168524
6 · The paper itself

Abstract

The rise of antimicrobial failure is a global emergency, and causes beyond typical genetic resistance must be determined. One probable factor is the existence of subpopulations of transiently growth-arrested bacteria, persisters, that endure antibiotic treatment despite genetic susceptibility to the drug. The presence of persisters in infected hosts has been successfully established, notably through the development of fluorescent reporters. It is proposed that infection relapse is caused by persisters resuming growth after cessation of the antibiotic treatment, but to date, there is no direct evidence for this. This is because no tool or reporter currently exists to track the extent to which infection relapse is initiated by regrowth of persisters in the host. Indeed, once they have transitioned out of the persister state, the progeny of persisters are genetically and phenotypically identical to susceptible bacteria in the population, making it virtually impossible to ascertain the source of relapse. We designed pSCRATCH (plasmid for Selective CRISPR Array expansion To Check Heritage), a molecular tool that functions to record the state of antibiotic persistence in the genome of

Indexed as

Anti-Bacterial AgentsClustered Regularly Interspaced Short Palindromic RepeatsCRISPR-Cas SystemsDrug Resistance, BacterialGenome, BacterialGenomicsPlasmidsSalmonellaSalmonella InfectionsSalmonella typhimuriumAnti-Bacterial Agents

Identifiers

PMID39374386
PMCPMC11494289

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.