Evidence map›Paper›PMID 39373537›Full record

ArticlemBio2024

Epitranscriptomic m

Tarun Mishra, Stacia Phillips, Yutao Zhao, Bethany Wilms, Chuan He, Li Wu

Abstract read
In one paragraph

Article in mBio, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed.

  1. Article
  2. Review
  3. Elevated mBMC cancer · 2026
    Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Review
  9. Review
  10. High-resolution HIV-1 mNAR genomics and bioinformatics · 2025
    Article
  11. Single-base mJournal of virology · 2025
    Article
  12. Impact of NbioRxiv : the preprint server for biology · 2025
    Article
  13. mGenes to cells : devoted to molecular & cellular mechanisms · 2025
    Article
  14. Review
  15. Article
  16. Article
  17. Dynamic interplay between RNA NVeterinary research · 2025
    Article
  18. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Tarun MishraDepartment of Microbiology and Immunology, Carver College of Medicine, The University of Iowa, Iowa City, Iowa, USA.
Stacia Phillips *Department of Microbiology and Immunology, Carver College of Medicine, The University of Iowa, Iowa City, Iowa, USA.
Yutao Zhao *Department of Chemistry, Department of Biochemistry and Molecular Biology, Institute for Biophysical Dynamics, University of Chicago, Chicago, Illinois, USA.
Bethany WilmsDepartment of Microbiology and Immunology, Carver College of Medicine, The University of Iowa, Iowa City, Iowa, USA.
Chuan HeDepartment of Chemistry, Department of Biochemistry and Molecular Biology, Institute for Biophysical Dynamics, University of Chicago, Chicago, Illinois, USA.
Li WuDepartment of Microbiology and Immunology, Carver College of Medicine, The University of Iowa, Iowa City, Iowa, USA.ORCID 0000-0002-5468-2487

Funding

Viral VectorP30CA086862 · NCI · UNIVERSITY OF IOWA · PI Jon C.D. Houtman · 2000 to 2026
$70.0M
Transcriptome-wide base-resolution sequencing of pseudouridine in human normal and AD brain tissues-CEGS Admin supplement 2020-2021RM1HG008935 · NHGRI · UNIVERSITY OF CHICAGO · PI HE, CHUAN · 2016 to 2025
$24.4M
Targeting HIV-1 RNA modifications in latently infected CD4+ T cells for therapeutic developmentR61AI169659 · NIAID · UNIVERSITY OF IOWA · PI WU, LI · 2022 to 2024
$2.2M
Full Spectrum Cell Sorter Flow CytometerS10OD034193 · OD · UNIVERSITY OF IOWA · PI BALLAS, ZUHAIR K. · 2023 to 2023
$526k
HIV-1-induced upregulation of m6A modifications of cellular RNA in CD4+ T-cellsR21AI170070 · NIAID · UNIVERSITY OF IOWA · PI PHILLIPS, STACIA L, WU, LI · 2022 to 2023
$425k
HHS | National Institutes of Health (NIH) R21AI170070HHS | National Institutes of Health (NIH) R61AI169659, P30CA086862-24S1, R21AI170070HHS | National Institutes of Health (NIH) RM1HG008935Howard Hughes Medical Institute (HHMI) HHMI Investigator (C.H.)NCI NIH HHS P30 CA086862NHGRI NIH HHS RM1 HG008935NIAID NIH HHS R21 AI170070NIAID NIH HHS R61 AI169659NIH HHS S10 OD034193
6 · The paper itself

Abstract

Despite effective antiretroviral therapy reducing HIV-1 viral loads to undetectable levels, the presence of latently infected CD4 IMPORTANCE: RNA m

Indexed as

AdenosineCD4-Positive T-LymphocytesHIV-1HIV InfectionsVirus ActivationVirus LatencyEpigenesis, GeneticGene Expression Regulation, ViralHumansJurkat CellsRNA, ViralTranscriptomeAdenosineN-methyladenosineRNA, ViralHIV-1 latency reversalJ-Lat cellsPOLR3Hprimary CD4+T cellsRNA m6A modificationTUG1

Identifiers

PMID39373537
PMCPMC11559067

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.