Evidence map›Paper›PMID 39373223›Full record

ArticleDisease models & mechanisms2024

Optimized methods to image hepatic lipid droplets in zebrafish larvae.

Nouf Khan, Talhah Mohd Salmi, Anthony P Karamalakis, Anjana Ramdas Nair, Kirsten C Sadler, Andrew G Cox

Abstract read
In one paragraph

Article in Disease models & mechanisms, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Nouf KhanProgram in Biology, New York University Abu Dhabi, PO Box 129188, Abu Dhabi, United Arab Emirates.
Talhah Mohd SalmiPeter MacCallum Cancer Centre, Melbourne, VIC 3000, Australia.
Anthony P KaramalakisPeter MacCallum Cancer Centre, Melbourne, VIC 3000, Australia.
Anjana Ramdas NairProgram in Biology, New York University Abu Dhabi, PO Box 129188, Abu Dhabi, United Arab Emirates.
Kirsten C SadlerProgram in Biology, New York University Abu Dhabi, PO Box 129188, Abu Dhabi, United Arab Emirates.ORCID 0000-0002-1100-4125
Andrew G CoxPeter MacCallum Cancer Centre, Melbourne, VIC 3000, Australia.ORCID 0000-0003-4189-9422

Funding

Australian Research Council DP200102693National Health and Medical Research Council GNT1176650New York University Abu DhabiSheikh Hamdan Bin Rashid Al Maktoum Award for Medical SciencesTed and Lila Seehusen FoundationUniversity of MelbourneYayasan Dayadiri
6 · The paper itself

Abstract

The optical transparency of zebrafish larvae enables visualization of subcellular structures in intact organs, and these vertebrates are widely used to study lipid biology and liver disease. Lipid droplet (LD) presence is a prevalent feature of healthy cells, but, under conditions such as nutrient excess, toxicant exposure or metabolic imbalance, LD accumulation in hepatocytes can be a harbinger of more severe forms of liver disease. We undertook a comprehensive analysis of approaches useful to investigate LD distribution and dynamics in physiological and pathological conditions in the liver of zebrafish larvae. This comparative analysis of the lipid dyes Oil Red O, Nile Red, LipidTox and LipidSpot, as well as transgenic LD reporters that rely on EGFP fusions of the LD-decorating protein perilipin 2 (PLIN2), demonstrates the strengths and limitations of each approach. These protocols are amenable to detection methods ranging from low-resolution stereomicroscopy to confocal imaging, which enables measurements of hepatic LD size, number and dynamics at cellular resolution in live and fixed animals. This resource will benefit investigators studying LD biology in zebrafish disease models.

Indexed as

Green Fluorescent ProteinsLarvaLiverZebrafishAnimalsAnimals, Genetically ModifiedAzo CompoundsLipid DropletsOxazinesPerilipin-2Zebrafish ProteinsAzo Compoundsenhanced green fluorescent proteinGreen Fluorescent Proteinsoil red OOxazinesPerilipin-2Zebrafish ProteinsLipid dropletLiver diseaseSteatosisZebrafish

Identifiers

PMID39373223
PMCPMC11625896

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.