Evidence map›Paper›PMID 39367362›Full record

ArticleBMC biotechnology2024

Microarray-based evaluation of selected recombinant timothy grass allergens expressed in E. Coli and N. Benthamiana.

Laimis Silimavicius, Lieve Tchebotarev, Mindaugas Zaveckas, Raimundas Razanskas, Laima Cepulyte, Karolina Bielske, Indre Kucinskaite-Kodze, Linas Griguola, Kotryna Linauskiene, Rasa Petraityte-Burneikiene

Abstract read
In one paragraph

Article in BMC biotechnology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
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1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Laimis SilimaviciusInstitute of Biotechnology, Life Sciences Center, Vilnius University, Sauletekio av. 7, Vilnius, 10257, Lithuania. laimis.silimavicius@gmc.vu.lt.
Lieve TchebotarevImunodiagnostika, Moletu str. 16, 14260, Didzioji Riese, Lithuania.
Mindaugas ZaveckasInstitute of Biotechnology, Life Sciences Center, Vilnius University, Sauletekio av. 7, Vilnius, 10257, Lithuania.
Raimundas RazanskasInstitute of Biotechnology, Life Sciences Center, Vilnius University, Sauletekio av. 7, Vilnius, 10257, Lithuania.
Laima CepulyteInstitute of Biotechnology, Life Sciences Center, Vilnius University, Sauletekio av. 7, Vilnius, 10257, Lithuania.
Karolina BielskeInstitute of Biotechnology, Life Sciences Center, Vilnius University, Sauletekio av. 7, Vilnius, 10257, Lithuania.
Indre Kucinskaite-KodzeInstitute of Biotechnology, Life Sciences Center, Vilnius University, Sauletekio av. 7, Vilnius, 10257, Lithuania.
Linas GriguolaImunodiagnostika, Moletu str. 16, 14260, Didzioji Riese, Lithuania.
Kotryna LinauskieneClinic of Chest Diseases, Immunology and Allergology, Faculty of Medicine, Vilnius University, M. K. Ciurlionio str. 21, Vilnius, 03101, Lithuania.
Rasa Petraityte-BurneikieneInstitute of Biotechnology, Life Sciences Center, Vilnius University, Sauletekio av. 7, Vilnius, 10257, Lithuania.

Funding

European Regional Development Fund J05-LVPA-K-01-0155
6 · The paper itself

Abstract

backgroundTimothy grass (Phleum pratense) is a significant source of allergens, and recombinant allergens are increasingly used for diagnostic purposes. However, the performance of different recombinant allergen production systems in diagnostic assays needs further investigation to optimize their use in clinical settings.

objectiveThe main objective of this study was to analyze and compare the diagnostic performance of recombinant timothy grass allergens produced in E. coli and N. benthamiana using a custom-made microarray chip.

methodsRecombinant timothy grass allergens Phl p 1, Phl p 2, Phl p 5, Phl p 6, Phl p 11, and Phl p 12 were produced in E. coli and/or N. benthamiana. A total of 113 patient serum samples were tested to evaluate the diagnostic sensitivity, specificity, inter-assay variability, and correlation of allergen-specific IgE detection compared to commercial multiplex tests (ALEX and ISAC). Additionally, the prevalence of sIgE to these allergens was assessed.

resultsPhl p 1, Phl p 2, Phl p 5, Phl p 6 and Phl p 11 showed high or very high positive correlation in immunoreactivity with other commercial multiplex tests. Notably, Phl p 11 fused with maltose-binding protein (MBP) demonstrated high diagnostic specificity and sensitivity, with a 0.3 arbitrary cut-off value. However, a high intra-assay variation was observed. The study also assessed specific IgE prevalence to timothy grass allergens within the tested patient cohort.

conclusionsRecombinant allergens from both E. coli and N. benthamiana demonstrated strong diagnostic potential on the microarray platform, with Phl p 11 (MBP-fused) showing particularly high performance. High intra-assay variation highlights the need for further optimization in allergen formulation and microarray storage conditions. These results highlight the potential of recombinant allergens for diagnostic applications, despite challenges with allergen stability in microarray formats. Specific IgE prevalence to timothy allergens revealed a sensitization profile consistent with findings from multiple studies.

Indexed as

AllergensEscherichia coliImmunoglobulin EPhleumRecombinant ProteinsAdultFemaleHumansMaleMiddle AgedPlant ProteinsProtein Array AnalysisSensitivity and SpecificityAllergensImmunoglobulin EPlant ProteinsRecombinant ProteinsAllergen microarrayMaltose-binding proteinRecombinant allergenTimothy grass pollen

Identifiers

PMID39367362
PMCPMC11451218

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.