Evidence map›Paper›PMID 39366995›Full record

ArticleNature communications2024

Structural elucidation of recombinant Trichomonas vaginalis 20S proteasome bound to covalent inhibitors.

Jan Silhan, Pavla Fajtova, Jitka Bartosova, Brianna M Hurysz, Jehad Almaliti, Yukiko Miyamoto, Lars Eckmann, William H Gerwick, Anthony J O'Donoghue, Evzen Boura

Abstract read
In one paragraph

Article in Nature communications, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Review
  2. Review
  3. Article
  4. A recombinant expression system for thebioRxiv : the preprint server for biology · 2025
    Article
  5. Exploring theAntimicrobial agents and chemotherapy · 2025
    Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

10 authors.

Jan Silhan *Institute of Organic Chemistry and Biochemistry AS CR, v.v.i., Prague, Czech Republic.ORCID 0000-0003-3868-5714
Pavla Fajtova *Institute of Organic Chemistry and Biochemistry AS CR, v.v.i., Prague, Czech Republic. fajtova@uochb.cas.cz.ORCID 0000-0002-4029-0706
Jitka BartosovaInstitute of Organic Chemistry and Biochemistry AS CR, v.v.i., Prague, Czech Republic.
Brianna M HuryszSkaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, La Jolla, CA, USA.
Jehad AlmalitiDepartment Pharmaceutical Sciences, College of Pharmacy, The University of Jordan, Amman, Jordan.
Yukiko MiyamotoDepartment of Medicine, School of Medicine, University of California San Diego, La Jolla, CA, USA.
Lars EckmannDepartment of Medicine, School of Medicine, University of California San Diego, La Jolla, CA, USA.
William H GerwickScripps Institution of Oceanography, University of California San Diego, La Jolla, CA, USA.
Anthony J O'DonoghueSkaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, La Jolla, CA, USA. ajodonoghue@health.ucsd.edu.ORCID 0000-0001-5695-0409
Evzen BouraInstitute of Organic Chemistry and Biochemistry AS CR, v.v.i., Prague, Czech Republic. boura@uochb.cas.cz.ORCID 0000-0002-9652-4065

Funding

GRADUATE TRAINING IN CELLULAR &MOLECULAR PHARMACOLOGYT32GM007752 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI BROWN, JOAN HELLER, HANDEL, TRACY M · 1985 to 2023
$13.5M
San Diego Digestive Diseases Research CenterP30DK120515 · NIDDK · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI Bernd G. Schnabl · 2019 to 2026
$10.8M
Proteasome inhibitors against mucosal protozoan pathogensR01AI158612 · NIAID · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI ECKMANN, LARS, O'DONOGHUE, ANTHONY JOHN · 2021 to 2025
$3.2M
Selective proteasome inhibitors for trichomoniasisR21AI146387 · NIAID · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI ECKMANN, LARS, O'DONOGHUE, ANTHONY JOHN · 2019 to 2020
$433k
NIAID NIH HHS R01 AI158612NIAID NIH HHS R21 AI146387NIDDK NIH HHS P30 DK120515NIGMS NIH HHS T32 GM007752
6 · The paper itself

Abstract

The proteasome is a proteolytic enzyme complex essential for protein homeostasis in mammalian cells and protozoan parasites like Trichomonas vaginalis (Tv), the cause of the most common, non-viral sexually transmitted disease. Tv and other protozoan 20S proteasomes have been validated as druggable targets for antimicrobials. However, low yields and purity of the native proteasome have hindered studies of the Tv 20S proteasome (Tv20S). We address this challenge by creating a recombinant protozoan proteasome by expressing all seven α and seven β subunits of Tv20S alongside the Ump-1 chaperone in insect cells. The recombinant Tv20S displays biochemical equivalence to its native counterpart, confirmed by various assays. Notably, the marizomib (MZB) inhibits all catalytic subunits of Tv20S, while the peptide inhibitor carmaphycin-17 (CP-17) specifically targets β2 and β5. Cryo-electron microscopy (cryo-EM) unveils the structures of Tv20S bound to MZB and CP-17 at 2.8 Å. These findings explain MZB's low specificity for Tv20S compared to the human proteasome and demonstrate CP-17's higher specificity. Overall, these data provide a structure-based strategy for the development of specific Tv20S inhibitors to treat trichomoniasis.

Indexed as

Cryoelectron MicroscopyProteasome Endopeptidase ComplexProteasome InhibitorsRecombinant ProteinsTrichomonas vaginalisAnimalsHumansModels, MolecularProtozoan ProteinsProteasome Endopeptidase ComplexProteasome InhibitorsProtozoan ProteinsRecombinant Proteins

Identifiers

PMID39366995
PMCPMC11452676

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.