Evidence map›Paper›PMID 39365851›Full record

ArticleScience advances2024

Conditional lethality profiling reveals anticancer mechanisms of action and drug-nutrient interactions.

Kyle M Flickinger, Kelli M Wilson, Nicholas J Rossiter, Andrea L Hunger, Paresh V Vishwasrao, Tobie D Lee, Carlos A Mellado Fritz, Rebecca M Richards, Matthew D Hall, Jason R Cantor

Abstract read
In one paragraph

Article in Science advances, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed.

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  10. MultiplexedbioRxiv : the preprint server for biology · 2025
    Article
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

10 authors.

Kyle M FlickingerMorgridge Institute for Research, Madison, WI 53715, USA.ORCID 0009-0003-3538-5887
Kelli M WilsonDivision of Preclinical Innovation, National Center for Advancing Translational Sciences, National Institutes of Health, Rockville, MD, 20850, USA.ORCID 0000-0003-2636-2766
Nicholas J RossiterCellular and Molecular Biology Program, University of Michigan, Ann Arbor, MI 48109, USA.ORCID 0000-0001-7333-1546
Andrea L HungerDepartment of Biochemistry, University of Wisconsin-Madison, Madison, WI 53706, USA.ORCID 0000-0002-9891-7110
Paresh V VishwasraoDivision of Hematology, Oncology, and Bone Marrow Transplant, University of Wisconsin-Madison, Madison, WI 53706, USA.
Tobie D LeeEarly Translation Branch, National Center for Advancing Translational Sciences, National Institutes of Health, Rockville, MD, 20850, USA.ORCID 0000-0001-5331-2997
Carlos A Mellado FritzMorgridge Institute for Research, Madison, WI 53715, USA.ORCID 0009-0008-9040-9243
Rebecca M RichardsDivision of Hematology, Oncology, and Bone Marrow Transplant, University of Wisconsin-Madison, Madison, WI 53706, USA.ORCID 0000-0001-6815-969X
Matthew D HallEarly Translation Branch, National Center for Advancing Translational Sciences, National Institutes of Health, Rockville, MD, 20850, USA.ORCID 0000-0002-5073-442X
Jason R CantorMorgridge Institute for Research, Madison, WI 53715, USA.ORCID 0000-0001-5263-2059

Funding

Biotechnology Training ProgramT32GM135066 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI SCOTT M. COYLE, BRIAN G FOX · 2020 to 2026
$7.0M
Cellular and Molecular Biology at MichiganT32GM145470 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI John Chadwick Brenner · 2022 to 2026
$4.1M
NOT-gated CAR T cells to overcome on-target, off-tumor toxicity in AMLK08CA266930 · NCI · UNIVERSITY OF WISCONSIN-MADISON · PI Rebecca Margaret Richards · 2022 to 2026
$1.2M
Use of Physiologic Media to Study Metabolic Regulation and Requirements in CancerK22CA225864 · NCI · MORGRIDGE INSTITUTE FOR RESEARCH, INC. · PI CANTOR, JASON ROBERT · 2019 to 2021
$569k
NCI NIH HHS K08 CA266930NCI NIH HHS K22 CA225864NIGMS NIH HHS T32 GM135066NIGMS NIH HHS T32 GM145470
6 · The paper itself

Abstract

Chemical screens across hundreds of cell lines have shown that the drug sensitivities of human cancers can vary by genotype or lineage. However, most drug discovery studies have relied on culture media that poorly reflect metabolite levels in human blood. Here, we perform drug screens in traditional and Human Plasma-Like Medium (HPLM). Sets of compounds that show conditional anticancer activity span different phases of global development and include non-oncology drugs. Comparisons of the synthetic and serum-derived components that comprise typical media trace sets of conditional phenotypes to nucleotide synthesis substrates. We also characterize a unique dual mechanism for brivudine, a compound approved for antiviral use. Brivudine selectively impairs cell growth in low folate conditions by targeting two enzymes involved in one-carbon metabolism. Cataloged gene essentiality data further suggest that conditional phenotypes for other compounds are linked to off-target effects. Our findings establish general strategies for identifying drug-nutrient interactions and mechanisms of action by exploiting conditional lethality in cancer cells.

Indexed as

Antineoplastic AgentsCell Line, TumorCell ProliferationCulture MediaDrug Screening Assays, AntitumorFolic AcidHumansNeoplasmsNutrientsAntineoplastic AgentsCulture MediaFolic AcidNutrients

Identifiers

PMID39365851
PMCPMC11451515

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.