Evidence map›Paper›PMID 39365492›Full record

ArticleJournal of molecular modeling2024

A DFT study of the effect of hydrostatic pressure on the structure and electronic properties of sarcosine crystal.

Geanso M de Moura, Mateus R Lage, Adenilson Santos, Rodrigo Gester, Stanislav R Stoyanov, Tarciso Andrade-Filho

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Article in Journal of molecular modeling, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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1 · What the graph read from it

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2 · The registry

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3 · Its place in the literature

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4 · The record

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5 · Who and what money

Authors and funding

6 authors.

Geanso M de MouraPrograma de Pós-Graduação em Ciências do Materiais, Universidade Federal do Maranhão, Imperatriz, Maranhão, Brazil.
Mateus R LageCurso de Ciência e Tecnologia, Universidade Federal do Maranhão, 65800-000, Balsas, MA, Brazil.
Adenilson SantosCentro de Ciências Sociais Saúde e Tecnologia (CCSST), Universidade Federal do Maranhão - UFMA, R. Urbano Santos, s/n, Imperatriz, MA, 65900-410, Brazil.
Rodrigo GesterFaculdade de Física, Universidade Federal do Sul e Sudeste do Pará, Marabá, PA, 68507-590, Brazil.
Stanislav R StoyanovNatural Resources Canada, CanmetENERGY Devon, 1 Oil Patch Drive, Devon, Alberta, T9G 1A8, Canada. stanislav.stoyanov@nrcan-rncan.gc.ca.
Tarciso Andrade-FilhoFaculdade de Física, Universidade Federal do Sul e Sudeste do Pará, Marabá, PA, 68507-590, Brazil.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

contextWe perform density functional theory calculations to study the dependence of the structural and electronic properties of the amino acid sarcosine crystal structure on hydrostatic pressure application. The results are analyzed and compared with the available experimental data. Our findings indicate that the crystal structure and properties of sarcosine calculated using the Grimme dispersion-corrected PBE functional (PBE-D3) best agree with the available experimental results under hydrostatic pressure of up to 3.7 GPa. Critical structural rearrangements, such as unit cell compression, head-to-tail compression, and molecular rotations, are investigated and elucidated in the context of experimental findings. Band gap energy tuning and density of state shifts indicative of band dispersion are presented concerning the structural changes arising from the elevated pressure. The calculated properties indicate that sarcosine holds great promise for application in electronic devices that involve pressure-induced structural changes.

methodsThree widely used generalized gradient approximation functionals-PBE, PBEsol, and revPBE-are employed with Grimme's D3 dispersion correction. The non-local van der Waals density functional vdW-DF is also evaluated. The calculations are performed using the projector-augmented wave method in the Quantum Espresso software suite. The geometry optimization results are visualized using VMD. The Multiwfn and NCIPlot programs are used for wavefunction and intermolecular interaction analyses.

Indexed as

Band gap energy tuningDensity functional theory calculationsDispersion interactionsElectronic structure and propertiesHydrostatic pressureN-methylglycineNon-covalent interactions

Identifiers

PMID39365492
PMCPMC11452461

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