Evidence map›Paper›PMID 39363368›Full record

ArticleVeterinary research2024

Spatio-temporal distribution and international context of bovine viral diarrhoea virus genetic diversity in France.

Claire Lescoat, Delphine Perrotte, Séverine Barry, Élise Oden, Valentin Herbet, Gaël Beaunée, Marc Tabouret, Fabienne Benoit, Pierre-Hugues Pitel, Véronique Duquesne and 3 more

Abstract read
In one paragraph

Article in Veterinary research, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Characterization ofViruses · 2026
    Article
  2. Article
  3. Article
  4. Molecular characteristics of a potentially novel BVDV (Frontiers in veterinary science · 2025
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Claire LescoatUniversité Clermont Auvergne, INRAE, VetAgro Sup, UMR EPIA, Saint-Genès-Champanelle, France.
Delphine PerrotteLaboratoire LABÉO, Caen, France.
Séverine BarryUniversité Clermont Auvergne, INRAE, VetAgro Sup, UMR EPIA, Saint-Genès-Champanelle, France.
Élise OdenLaboratoire LABÉO, Caen, France.
Valentin HerbetRuminant Disease and Welfare Unit, National Reference Laboratory for BVD, ANSES, Ploufragan-Plouzané-Niort Laboratory, Niort, France.
Gaël BeaunéeOniris, INRAE, UMR BIOEPAR, Nantes, France.
Marc TabouretRuminant Disease and Welfare Unit, National Reference Laboratory for BVD, ANSES, Ploufragan-Plouzané-Niort Laboratory, Niort, France.
Fabienne BenoitLaboratoire LABÉO, Caen, France.
Pierre-Hugues PitelLaboratoire LABÉO, Caen, France.
Véronique DuquesneANSES, Sophia Antipolis Laboratory, Sophia Antipolis, France.
Xavier BaillyUniversité Clermont Auvergne, INRAE, VetAgro Sup, UMR EPIA, Saint-Genès-Champanelle, France.
Julien Thézé *Université Clermont Auvergne, INRAE, VetAgro Sup, UMR EPIA, Saint-Genès-Champanelle, France. julien.theze@inrae.fr.ORCID http://orcid.org/0000-0001-8188-9494
Guy Kouokam *Ruminant Disease and Welfare Unit, National Reference Laboratory for BVD, ANSES, Ploufragan-Plouzané-Niort Laboratory, Niort, France.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Bovine viral diarrhoea (BVD) is one of the most economically damaging livestock enzootic diseases in the world. BVD aetiological agents are three pestiviruses (BVDV-1, -2 and HoBi-like pestivirus), which exhibit high genetic diversity and complex transmission cycles. This considerably hampers the management of the disease, which is why eradication plans have been implemented in several countries. In France, a national plan has been in place since 2019. Our understanding of its impact on the distribution of BVDV genotypes is limited by the availability of French genetic data. Here, we conducted a molecular epidemiology study to refine our knowledge of BVDV genetic diversity in France, characterise its international relationships, and analyse national spatio-temporal genotypic distribution. We collated 1037 BVDV-positive samples throughout France between 2011 and 2023, with a greater sampling effort in two major cattle production areas. We developed a high-throughput sequencing protocol which we used to complete the 5'UTR genotyping of this collection. We show that two main BVDV-1 genotypes, 1e and 1b, account for 88% of genotyped sequences. We also identified seven other BVDV-1 genotypes occurring at low frequencies and three BVDV-2 samples (genotype 2c). Phylogenetic analyses indicate different worldwide distribution patterns between the two main BVDV-1 genotypes. Their relative frequencies present no major changes in France since the 1990s and few variations at the national scale. We also found some degree of local spatial structuring in western France. Overall, our results demonstrate the potential of large-scale sequence-based surveillance to monitor changes in the epidemiological situation of enzootic diseases.

Indexed as

Bovine Virus Diarrhea-Mucosal DiseaseGenetic VariationGenotypeAnimalsCattleDiarrhea Virus 1, Bovine ViralDiarrhea Virus 2, Bovine ViralDiarrhea Viruses, Bovine ViralFranceMolecular EpidemiologyPhylogenySpatio-Temporal Analysis5’UTRcattleeradication plangenotypesnext-generation sequencingPestivirus bovisphylogeneticsspatial structure

Identifiers

PMID39363368
PMCPMC11451180

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.