Evidence map›Paper›PMID 39363320›Full record

Trial reportMolecular cancer2024

Deciphering resistance mechanisms in cancer: final report of MATCH-R study with a focus on molecular drivers and PDX development.

Damien Vasseur, Ludovic Bigot, Kristi Beshiri, Juan Flórez-Arango, Francesco Facchinetti, Antoine Hollebecque, Lambros Tselikas, Mihaela Aldea, Felix Blanc-Durand, Anas Gazzah and 20 more

Registry-linked trialAbstract readClinical Trial
In one paragraph

Trial report in Molecular cancer, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT02517892 (A Prospective Trial to Study the Evolution of Clonal Architecture of Tumors From Patients Treated With Molecular Targeted Agents), which is not on this map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT02517892 nacompletednot on this map

A Prospective Trial to Study the Evolution of Clonal Architecture of Tumors From Patients Treated With Molecular Targeted Agents

TypeinterventionalSponsorGustave Roussy, Cancer Campus, Grand ParisRan2014 to 2025Enrolled1,500ConditionsMetastatic Oncogen-driven CancerArmsBiopsy
3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Recurrent Resistance Mutations to Lirafugratinib Inform Treatment Sequencing in FGFR2-Driven Tumors.Clinical cancer research : an official journal of the American Association for Cancer Research · 2026
    Trial
  2. Article
  3. Review
  4. Review
  5. Review
  6. Article
  7. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

30 authors.

Damien Vasseur *Medical Biology and Pathology Department, Gustave Roussy, Villejuif, France.
Ludovic Bigot *Université Paris-Saclay, Gustave Roussy, Inserm U981, Villejuif, France.
Kristi Beshiri *Département d'Innovation Thérapeutique (DITEP), Gustave Roussy, Villejuif, France.
Juan Flórez-ArangoUniversité Paris-Saclay, Gustave Roussy, Inserm U981, Villejuif, France.
Francesco FacchinettiUniversité Paris-Saclay, Gustave Roussy, Inserm U981, Villejuif, France.
Antoine HollebecqueDépartement d'Innovation Thérapeutique (DITEP), Gustave Roussy, Villejuif, France.
Lambros TselikasDepartment of Interventional Radiology, BIOTHERIS, Gustave Roussy, Université Paris-Saclay, Villejuif, France.
Mihaela AldeaDépartement de Médecine Oncologique, Gustave Roussy, Villejuif, France.
Felix Blanc-DurandDépartement de Médecine Oncologique, Gustave Roussy, Villejuif, France.
Anas GazzahDépartement d'Innovation Thérapeutique (DITEP), Gustave Roussy, Villejuif, France.
David PlanchardDépartement de Médecine Oncologique, Gustave Roussy, Villejuif, France.
Ludovic LacroixMedical Biology and Pathology Department, Gustave Roussy, Villejuif, France.
Noémie Pata-MerciAMMICa UAR3655/US23, Gustave Roussy, Villejuif, France.
Catline NobreUniversité Paris-Saclay, Gustave Roussy, Inserm U981, Villejuif, France.
Alice Da SilvaUniversité Paris-Saclay, Gustave Roussy, Inserm U981, Villejuif, France.
Claudio NicotraDépartement d'Innovation Thérapeutique (DITEP), Gustave Roussy, Villejuif, France.
Maud Ngo-CamusDépartement d'Innovation Thérapeutique (DITEP), Gustave Roussy, Villejuif, France.
Floriane BrayeUniversité Paris-Saclay, Gustave Roussy, Inserm U981, Villejuif, France.
Sergey I NikolaevUniversité Paris-Saclay, Gustave Roussy, Inserm U981, Villejuif, France.
Stefan MichielsUniversité Paris-Saclay, CESP, InsermVillejuif, France.
Gérôme Jules-ClementBioinformatics Core Facility, Gustave Roussy, Université Paris-Saclay, CNRS UMS 3655, Inserm US23, Villejuif, France.
Ken André OlaussenUniversité Paris-Saclay, Gustave Roussy, Inserm U981, Villejuif, France.
Fabrice AndréUniversité Paris-Saclay, Gustave Roussy, Inserm U981, Villejuif, France.
Jean-Yves ScoazecMedical Biology and Pathology Department, Gustave Roussy, Villejuif, France.
Fabrice BarlesiDépartement de Médecine Oncologique, Gustave Roussy, Villejuif, France.
Santiago PonceUniversité Paris-Saclay, Gustave Roussy, Inserm U981, Villejuif, France.
Jean-Charles SoriaUniversité Paris-Saclay, Gustave Roussy, Inserm U981, Villejuif, France.
Benjamin BesseUniversité Paris-Saclay, Gustave Roussy, Inserm U981, Villejuif, France.
Yohann LoriotUniversité Paris-Saclay, Gustave Roussy, Inserm U981, Villejuif, France. yohann.loriot@gustaveroussy.fr.
Luc FribouletUniversité Paris-Saclay, Gustave Roussy, Inserm U981, Villejuif, France. luc.friboulet@gustaveroussy.fr.

Funding

European Research Council 101044047
6 · The paper itself

Abstract

backgroundUnderstanding the resistance mechanisms of tumor is crucial for advancing cancer therapies. The prospective MATCH-R trial (NCT02517892), led by Gustave Roussy, aimed to characterize resistance mechanisms to cancer treatments through molecular analysis of fresh tumor biopsies. This report presents the genomic data analysis of the MATCH-R study conducted from 2015 to 2022 and focuses on targeted therapies.

methodsThe study included resistant metastatic patients (pts) who accepted an image-guided tumor biopsy. After evaluation of tumor content (TC) in frozen tissue biopsies, targeted NGS (10 < TC < 30%) or Whole Exome Sequencing and RNA sequencing (TC > 30%) were performed before and/or after the anticancer therapy. Patient-derived xenografts (PDX) were established by implanting tumor fragments into NOD scid gamma mice and amplified up to five passages.

resultsA total of 1,120 biopsies were collected from 857 pts with the most frequent tumor types being lung (38.8%), digestive (16.3%) and prostate (14.1%) cancer. Molecular targetable driver were identified in 30.9% (n = 265/857) of the patients, with EGFR (41.5%), FGFR2/3 (15.5%), ALK (11.7%), BRAF (6.8%), and KRAS (5.7%) being the most common altered genes. Furthermore, 66.0% (n = 175/265) had a biopsy at progression on targeted therapy. Among resistant cases, 41.1% (n = 72/175) had no identified molecular mechanism, 32.0% (n = 56/175) showed on-target resistance, and 25.1% (n = 44/175) exhibited a by-pass resistance mechanism. Molecular profiling of the 44 patients with by-pass resistance identified 51 variants, with KRAS (13.7%), PIK3CA (11.8%), PTEN (11.8%), NF2 (7.8%), AKT1 (5.9%), and NF1 (5.9%) being the most altered genes. Treatment was tailored for 45% of the patients with a resistance mechanism identified leading to an 11 months median extension of clinical benefit. A total of 341 biopsies were implanted in mice, successfully establishing 136 PDX models achieving a 39.9% success rate. PDX models are available for EGFR (n = 31), FGFR2/3 (n = 26), KRAS (n = 18), ALK (n = 16), BRAF (n = 6) and NTRK (n = 2) driven cancers. These models closely recapitulate the biology of the original tumors in term of molecular alterations and pharmacological status, and served as valuable models to validate overcoming treatment strategies.

conclusionThe MATCH-R study highlights the feasibility of on purpose image guided tumor biopsies and PDX establishment to characterize resistance mechanisms and guide personalized therapies to improve outcomes in pre-treated metastatic patients.

Indexed as

Drug Resistance, NeoplasmNeoplasmsAdultAgedAged, 80 and overAnimalsBiomarkers, TumorExome SequencingFemaleHumansMaleMiceMice, SCIDMiddle AgedMolecular Targeted TherapyMutationBiomarkers, TumorBiopsyCancerMetastaticPDXResistanceTargeted therapy

Identifiers

PMID39363320
PMCPMC11451117

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.