Evidence map›Paper›PMID 39363161›Full record

ArticleVirology journal2024

Lineage and sublineage analysis of human papillomavirus type 58 in iranian women.

Mohammad Shabanpour, Parvin Jalali-Alhosseini, Zabihollah Shoja, Fatemeh Ghafoori-Ghahdarijani, Sima Taherkhani, Somayeh Jalilvand

Abstract read
In one paragraph

Article in Virology journal, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Review
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Mohammad ShabanpourDepartment of Virology, School of Public Health, Tehran University of Medical Sciences, Tehran, 14155, Iran.
Parvin Jalali-AlhosseiniDepartment of Virology, School of Public Health, Tehran University of Medical Sciences, Tehran, 14155, Iran.
Zabihollah ShojaDepartment of Virology, Pasteur Institute of Iran, Tehran, Iran.
Fatemeh Ghafoori-GhahdarijaniDepartment of Virology, School of Public Health, Tehran University of Medical Sciences, Tehran, 14155, Iran.
Sima TaherkhaniDepartment of Virology, School of Public Health, Tehran University of Medical Sciences, Tehran, 14155, Iran.
Somayeh JalilvandDepartment of Virology, School of Public Health, Tehran University of Medical Sciences, Tehran, 14155, Iran. sjalilvand@tums.ac.ir.

Funding

Tehran University of Medical Sciences and Health Services 68275
6 · The paper itself

Abstract

backgroundVariant analysis of distinct HPV types is important from different aspects including epidemiology, pathogenicity, and evolution.

methodsFor this reason, the full sequence of the E6 and E7 genes of HPV 58 was examined in 130 HPV 58-infected cervical samples using PCR and sequencing.

resultsOur results revealed that three lineages A, B, and D were found in this study; among which the B lineage was more common (91.50%). About sublineages, all samples of the B lineage belonged to the B1 sublineage, and samples that were classified as the A and D lineages were found to belong to the A1 (0.77%), A2 (5.38%), A3 (1.50%), and D2 (0.77%) sublineages. No statistically significant differences were found between lineages and stages of disease or amino acid changes (P > 0.05).

conclusionOur results showed that lineage B, sublineage B1, was dominant in Iran. However, more studies with larger sample sizes from different parts of Iran are essential for assessing the pathogenicity risk of HPV 58 lineages in Iranian women with cervical cancer.

Indexed as

GenotypePapillomavirus InfectionsPhylogenyAdultAlphapapillomavirusCervix UteriDNA, ViralFemaleHuman Papillomavirus VirusesHumansIranMiddle AgedOncogene Proteins, ViralPapillomaviridaePapillomavirus E7 ProteinsPolymerase Chain ReactionDNA, ViralOncogene Proteins, ViralPapillomavirus E7 ProteinsCervical cancerHPV 58Human papillomavirusLineageSublineage

Identifiers

PMID39363161
PMCPMC11451209

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.