Evidence map›Paper›PMID 39363105›Full record

ArticleNature microbiology2024

Host cell glycosylation selects for infection with CCR5- versus CXCR4-tropic HIV-1.

Hannah L Itell, Jamie Guenthoer, Daryl Humes, Nell E Baumgarten, Julie Overbaugh

Abstract read
In one paragraph

Article in Nature microbiology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Exceptionally broad HIV-1 neutralization via bispecific antibody-mediated prepositioning.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  8. Article
  9. Article
  10. Mucosal immunity in acute HIV: a review of recent work.Current opinion in HIV and AIDS · 2025
    Review
  11. Article
  12. bioRxiv : the preprint server for biology · 2024
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

5 authors.

Hannah L ItellMolecular and Cellular Biology PhD Program, University of Washington, Seattle, WA, USA.
Jamie GuenthoerDivision of Human Biology, Fred Hutchinson Cancer Center, Seattle, WA, USA.
Daryl HumesDivision of Human Biology, Fred Hutchinson Cancer Center, Seattle, WA, USA.
Nell E BaumgartenDivision of Human Biology, Fred Hutchinson Cancer Center, Seattle, WA, USA.
Julie OverbaughDivision of Human Biology, Fred Hutchinson Cancer Center, Seattle, WA, USA. joverbau@fredhutch.org.ORCID http://orcid.org/0000-0002-0239-9444

Funding

TRAINING IN MOLECULAR AND CELLULAR BIOLOGYT32GM007270 · NIGMS · UNIVERSITY OF WASHINGTON · PI RAIBLE, DAVID W · 1985 to 2020
$21.0M
Innate immune determinants of HIV rebound and persistenceR01HD103571 · NICHD · FRED HUTCHINSON CANCER RESEARCH CENTER · PI JULIE M. OVERBAUGH · 2020 to 2026
$6.7M
Cell-intrinsic effectors of the antiviral interferon response against HIV in primary human samplesF31AI165168 · NIAID · FRED HUTCHINSON CANCER CENTER · PI ITELL, HANNAH · 2022 to 2023
$61k
NIAID NIH HHS F31 AI165168NICHD NIH HHS R01 HD103571NIGMS NIH HHS T32 GM007270U.S. Department of Health & Human Services | NIH | Eunice Kennedy Shriver National Institute of Child Health and Human Development (NICHD) R01HD103571U.S. Department of Health & Human Services | NIH | National Institute of Allergy and Infectious Diseases (NIAID) F31AI165168U.S. Department of Health & Human Services | NIH | National Institute of General Medical Sciences (NIGMS) T32GM007270
6 · The paper itself

Abstract

Human immunodeficiency virus type 1 (HIV-1) infection involves a selection bottleneck that leads to transmission of one or a few variants. C-C motif chemokine receptor 5 (CCR5) or C-X-C motif chemokine receptor 4 (CXCR4) can act as coreceptors for HIV-1 viral entry. However, initial infection mostly occurs via CCR5, despite abundant expression of CXCR4 on target cells. The host factors that influence HIV-1 susceptibility and selection during transmission are unclear. Here we conduct CRISPR-Cas9 screens and identify SLC35A2 (a transporter of UDP-galactose expressed in target cells in blood and mucosa) as a potent and specific CXCR4-tropic restriction factor in primary target CD4

Indexed as

CD4-Positive T-LymphocytesHIV-1HIV InfectionsReceptors, CCR5Receptors, CXCR4Viral TropismCRISPR-Cas SystemsGlycosylationHEK293 CellsHost-Pathogen InteractionsHumansPolysaccharidesVirus InternalizationCCR5 protein, humanCXCR4 protein, humanPolysaccharidesReceptors, CCR5Receptors, CXCR4

Identifiers

PMID39363105
PMCPMC12335854

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.