Evidence map›Paper›PMID 39363036›Full record

ArticleThe EMBO journal2024

A regulatory module mediating temperature control of cell-cell communication facilitates tree bud dormancy release.

Shashank K Pandey, Jay Prakash Maurya, Bibek Aryal, Kamil Drynda, Aswin Nair, Pal Miskolczi, Rajesh Kumar Singh, Xiaobin Wang, Yujiao Ma, Tatiana de Souza Moraes and 5 more

Abstract read
In one paragraph

Article in The EMBO journal, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. MIKC-Type MADS-Box Gene Analysis Reveals the Role ofPlants (Basel, Switzerland) · 2025
    Article
  7. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Shashank K Pandey *Umeå Plant Science Centre, Department of Forest Genetics and Plant Physiology, Swedish University of Agricultural Sciences, SE-901 87, Umeå, Sweden.ORCID http://orcid.org/0000-0002-0787-3125
Jay Prakash Maurya *Umeå Plant Science Centre, Department of Forest Genetics and Plant Physiology, Swedish University of Agricultural Sciences, SE-901 87, Umeå, Sweden.ORCID http://orcid.org/0000-0002-5105-7133
Bibek Aryal *Umeå Plant Science Centre, Department of Forest Genetics and Plant Physiology, Swedish University of Agricultural Sciences, SE-901 87, Umeå, Sweden.
Kamil Drynda *Centre for Mathematical Medicine and Biology, School of Mathematical Sciences, University of Nottingham, Nottingham, NG7 2RD, UK.ORCID http://orcid.org/0009-0000-2786-8027
Aswin NairUmeå Plant Science Centre, Department of Forest Genetics and Plant Physiology, Swedish University of Agricultural Sciences, SE-901 87, Umeå, Sweden.
Pal MiskolcziUmeå Plant Science Centre, Department of Forest Genetics and Plant Physiology, Swedish University of Agricultural Sciences, SE-901 87, Umeå, Sweden.
Rajesh Kumar SinghUmeå Plant Science Centre, Department of Forest Genetics and Plant Physiology, Swedish University of Agricultural Sciences, SE-901 87, Umeå, Sweden.ORCID http://orcid.org/0000-0001-7831-7946
Xiaobin WangUmeå Plant Science Centre, Department of Forest Genetics and Plant Physiology, Swedish University of Agricultural Sciences, SE-901 87, Umeå, Sweden.
Yujiao MaUmeå Plant Science Centre, Department of Forest Genetics and Plant Physiology, Swedish University of Agricultural Sciences, SE-901 87, Umeå, Sweden.ORCID http://orcid.org/0009-0006-5105-342X
Tatiana de Souza MoraesLaboratoire de Biogenèse Membranaire, UMR5200, CNRS, Université de Bordeaux, Villenave d'Ornon, France.
Emmanuelle M BayerLaboratoire de Biogenèse Membranaire, UMR5200, CNRS, Université de Bordeaux, Villenave d'Ornon, France.ORCID http://orcid.org/0000-0001-8642-5293
Etienne FarcotCentre for Mathematical Medicine and Biology, School of Mathematical Sciences, University of Nottingham, Nottingham, NG7 2RD, UK.
George W BasselSchool of Life Sciences, University of Warwick, Coventry, CV4 7AL, UK.
Leah R BandCentre for Mathematical Medicine and Biology, School of Mathematical Sciences, University of Nottingham, Nottingham, NG7 2RD, UK.
Rishikesh P BhaleraoUmeå Plant Science Centre, Department of Forest Genetics and Plant Physiology, Swedish University of Agricultural Sciences, SE-901 87, Umeå, Sweden. Rishi.Bhalerao@slu.se.ORCID http://orcid.org/0000-0003-4384-7036

Funding

Banaras Hindu University (BHU) 6031China Scholarship Council (CSC) 202206320357EC | Horizon Europe | Excellent Science | HORIZON EUROPE Marie Sklodowska-Curie Actions (MSCA) DECORE: SEP-210709191Human Frontier Science Program (HFSP) RGP0002/2020Human Frontier Science Program (HFSP) RGY0075/2020Knut och Alice Wallenbergs Stiftelse (Knut and Alice Wallenberg Foundation) 2023.0209Leverhulme Trust RPG-2019-267Shandong Provincial Natural Science Foundation ZR2021QC058UKRI | Biotechnology and Biological Sciences Research Council (BBSRC) BB/N009754/1 and BB/S002804/1Vetenskapsrådet (VR) 2020-03522Wenner-Gren Stiftelserna (Wenner-Gren Foundations) UPD2019-0203
6 · The paper itself

Abstract

The control of cell-cell communication via plasmodesmata (PD) plays a key role in plant development. In tree buds, low-temperature conditions (LT) induce a switch in plasmodesmata from a closed to an open state, which restores cell-to-cell communication in the shoot apex and releases dormancy. Using genetic and cell-biological approaches, we have identified a previously uncharacterized transcription factor, Low-temperature-Induced MADS-box 1 (LIM1), as an LT-induced, direct upstream activator of the gibberellic acid (GA) pathway. The LIM1-GA module mediates low temperature-induced plasmodesmata opening, by negatively regulating callose accumulation to promote dormancy release. LIM1 also activates expression of FT1 (FLOWERING LOCUS T), another LT-induced factor, with LIM1-FT1 forming a coherent feedforward loop converging on low-temperature regulation of gibberellin signaling in dormancy release. Mathematical modeling and experimental validation suggest that negative feedback regulation of LIM1 by gibberellin could play a crucial role in maintaining the robust temporal regulation of bud responses to low temperature. These results reveal genetic factors linking temperature control of cell-cell communication with regulation of seasonally-aligned growth crucial for adaptation of trees.

Indexed as

Cell CommunicationGene Expression Regulation, PlantGibberellinsArabidopsisArabidopsis ProteinsCold TemperaturePlant DormancyPlant ProteinsPlasmodesmataSignal TransductionTemperatureTranscription FactorsTreesArabidopsis Proteinsgibberellic acidGibberellinsPlant ProteinsTranscription FactorsCalloseDormancyGibberellinsPlasmodesmataTemperature

Identifiers

PMID39363036
PMCPMC11612439

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.