Evidence map›Paper›PMID 39361782›Full record

ReviewCritical reviews in biochemistry and molecular biology2024

The general transcription factors (GTFs) of RNA polymerase II and their roles in plant development and stress responses.

Shivam Sharma, Sanjay Kapoor, Athar Ansari, Akhilesh Kumar Tyagi

Abstract readReview
In one paragraph

Review in Critical reviews in biochemistry and molecular biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Review
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Shivam SharmaInter-disciplinary Centre for Plant Genomics and Department of Plant Molecular Biology, University of Delhi, New Delhi, India.
Sanjay KapoorInter-disciplinary Centre for Plant Genomics and Department of Plant Molecular Biology, University of Delhi, New Delhi, India.
Athar AnsariDepartment of Biological Science, Wayne State University, Detroit, MI, USA.
Akhilesh Kumar TyagiInter-disciplinary Centre for Plant Genomics and Department of Plant Molecular Biology, University of Delhi, New Delhi, India.ORCID 0000-0001-9096-7116

Funding

A new paradigm of general transcription factor TFIIB functionality in termination and promoter directionalityR01GM146803 · NIGMS · WAYNE STATE UNIVERSITY · PI Athar Imtiaz Ansari · 2022 to 2026
$1.6M
NIGMS NIH HHS R01 GM146803
6 · The paper itself

Abstract

In eukaryotes, general transcription factors (GTFs) enable recruitment of RNA polymerase II (RNA Pol II) to core promoters to facilitate initiation of transcription. Extensive research in mammals and yeast has unveiled their significance in basal transcription as well as in diverse biological processes. Unlike mammals and yeast, plant GTFs exhibit remarkable degree of variability and flexibility. This is because plant GTFs and GTF subunits are often encoded by multigene families, introducing complexity to transcriptional regulation at both cellular and biological levels. This review provides insights into the general transcription mechanism, GTF composition, and their cellular functions. It further highlights the involvement of RNA Pol II-related GTFs in plant development and stress responses. Studies reveal that GTFs act as important regulators of gene expression in specific developmental processes and help equip plants with resilience against adverse environmental conditions. Their functions may be direct or mediated through their cofactor nature. The versatility of GTFs in controlling gene expression, and thereby influencing specific traits, adds to the intricate complexity inherent in the plant system.

Indexed as

Gene Expression Regulation, PlantPlant DevelopmentRNA Polymerase IIStress, PhysiologicalTranscription Factors, GeneralPlant ProteinsPlantsTranscription, GeneticPlant ProteinsRNA Polymerase IITranscription Factors, GeneralAbiotic stressbiotic stressgeneral transcription factors (GTFs)plant developmentpreinitiation complex (PIC)RNA polymerase IItranscription

Identifiers

PMID39361782
PMCPMC12051360

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.