Evidence map›Paper›PMID 39361442›Full record

ArticleEmerging microbes & infections2024

Structural insights into alterations in the substrate spectrum of serine-β-lactamase OXA-10 from

Chae-Eun Lee, Yoonsik Park, Hyunjae Park, Kiwoong Kwak, Hyeonmin Lee, Jiwon Yun, Donghyun Lee, Jung Hun Lee, Sang Hee Lee, Lin-Woo Kang

Abstract read
In one paragraph

Article in Emerging microbes & infections, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Chae-Eun LeeDepartment of Biological Sciences, Konkuk University, Seoul, South Korea.ORCID 0009-0004-6107-6145
Yoonsik ParkDepartment of Biological Sciences, Konkuk University, Seoul, South Korea.ORCID 0000-0001-7685-1117
Hyunjae ParkDepartment of Biological Sciences, Konkuk University, Seoul, South Korea.ORCID 0000-0002-1252-2389
Kiwoong KwakDepartment of Biological Sciences, Konkuk University, Seoul, South Korea.ORCID 0009-0009-7352-1126
Hyeonmin LeeDepartment of Biological Sciences, Konkuk University, Seoul, South Korea.ORCID 0009-0002-5933-3128
Jiwon YunDepartment of Biological Sciences, Konkuk University, Seoul, South Korea.ORCID 0009-0003-2033-8076
Donghyun LeeDepartment of Biological Sciences, Konkuk University, Seoul, South Korea.ORCID 0009-0003-2415-432X
Jung Hun LeeNational Leading Research Laboratory of Drug Resistance Proteomics, Department of Biological Sciences, Myongji University, Yongin, South Korea.ORCID 0000-0001-5504-4033
Sang Hee LeeNational Leading Research Laboratory of Drug Resistance Proteomics, Department of Biological Sciences, Myongji University, Yongin, South Korea.ORCID 0000-0002-5660-7122
Lin-Woo KangDepartment of Biological Sciences, Konkuk University, Seoul, South Korea.ORCID 0000-0002-1411-3132

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The extensive use of β-lactam antibiotics has led to significant resistance, primarily due to hydrolysis by β-lactamases. OXA class D β-lactamases can hydrolyze a wide range of β-lactam antibiotics, rendering many treatments ineffective. We investigated the effects of single amino acid substitutions in OXA-10 on its substrate spectrum. Broad-spectrum variants with point mutations were searched and biochemically verified. Three key residues, G157D, A124T, and N73S, were confirmed in the variants, and their crystal structures were determined. Based on an enzyme kinetics study, the hydrolytic activity against broad-spectrum cephalosporins, particularly ceftazidime, was significantly enhanced by the G157D mutation in loop 2. The A124T or N73S mutation close to loop 2 also resulted in higher ceftazidime activity. All structures of variants with point mutations in loop 2 or nearby exhibited increased loop 2 flexibility, which facilitated the binding of ceftazidime. These results highlight the effect of a single amino acid substitution in OXA-10 on broad-spectrum drug resistance. Structure-activity relationship studies will help us understand the drug resistance spectrum of β-lactamases, enhance the effectiveness of existing β-lactam antibiotics, and develop new drugs.

Indexed as

Amino Acid SubstitutionAnti-Bacterial Agentsbeta-LactamasesPseudomonas aeruginosaCeftazidimeCephalosporinsCrystallography, X-RayHumansHydrolysisKineticsMicrobial Sensitivity TestsModels, MolecularPoint MutationProtein ConformationStructure-Activity RelationshipSubstrate SpecificityAnti-Bacterial Agentsbeta-lactamase OXA-10beta-LactamasesCeftazidimeCephalosporinsbroad-spectrum cephalosporinsOXA-10single amino acid substitutionssubstrate specificityβ-lactamase resistance

Identifiers

PMID39361442
PMCPMC11497580

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.