Evidence map›Paper›PMID 39358398›Full record

ArticleScientific data2024

Chromosome genome assembly and annotation of Adzuki Bean (Vigna angularis).

Wan Li, Fanglei He, Xueyang Wang, Qi Liu, Xiaoqing Zhang, Zhiquan Yang, Chao Fang, Hongtao Xiang

Abstract readDataset
In one paragraph

Article in Scientific data, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. High-contiguity genome assembly of moth bean (Frontiers in plant science · 2026
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Wan Li *Institute of Crop Cultivation and Tillage, Heilongjiang Academy of Agricultural Sciences, Harbin, 150086, China.
Fanglei He *Innovative Center of Molecular Genetics and Evolution, School of Life Sciences Guangzhou University, Guangzhou, 510405, China.
Xueyang Wang *Heilongjiang Academy of Agricultural Sciences, Harbin, 150086, China.
Qi LiuHeilongjiang Academy of Agricultural Sciences, Harbin, 150086, China.
Xiaoqing ZhangHeilongjiang Academy of Agricultural Sciences, Harbin, 150086, China.
Zhiquan YangInnovative Center of Molecular Genetics and Evolution, School of Life Sciences Guangzhou University, Guangzhou, 510405, China. yang_zq@foxmail.com.ORCID 0000-0001-6283-0753
Chao FangInnovative Center of Molecular Genetics and Evolution, School of Life Sciences Guangzhou University, Guangzhou, 510405, China. fangchao@gzhu.edu.cn.
Hongtao XiangInstitute of Crop Cultivation and Tillage, Heilongjiang Academy of Agricultural Sciences, Harbin, 150086, China. zpszls@aliyun.com.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Adzuki bean (Vigna angularis) is a significant dietary legume crop that is prevalent in East Asia. It also holds traditional medicinal importance in China. In this study, we report a high-quality, chromosome-level genome assembly of adzuki bean obtained by employing Illumina short-read sequencing, PacBio long-read sequencing, and Hi-C technology. The assembly spans 447.8 Mb, encompassing 96.32% of the estimated genome, with contig and scaffold N50 values of 16.5 and 41.0 Mb, respectively. More than 98.2% of the 1,614 BUSCO genes were fully identified, and 25,939 genes were annotated, with 98.23% of them being functionally identifiable. Vigna angularis was estimated to diverge successively from Vigna unguiculata and Vigna radiata about 15.3 and 8.7 million years ago (Ma), respectively. This chromosome-level reference genome of Vigna angularis provides a robust foundation for exploring the functional genomics and genome evolution of adzuki bean, thereby facilitating advancements in molecular breeding of adzuki bean.

Indexed as

Genome, PlantMolecular Sequence AnnotationVignaChromosomes, Plant

Identifiers

PMID39358398
PMCPMC11446921

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.