Evidence map›Paper›PMID 39358370›Full record

ArticleScientific reports2024

Genome resequencing and genome-wide polymorphisms in mosquito vectors Aedes aegypti and Aedes albopictus from south India.

Preeti Acharya, Upasana Shyamsunder Singh, Veeramanoharan Rajamannar, Mayilsamy Muniaraj, Binata Nayak, Aparup Das

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Article in Scientific reports, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Review
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

6 authors.

Preeti AcharyaSambalpur University, Jyoti Vihar, Sambalpur, Odisha, 768019, India.
Upasana Shyamsunder SinghDepartment of Biological Sciences, Vanderbilt University, Nashville, TN, USA.
Veeramanoharan RajamannarICMR-Vector Control Research Centre Field Station, Madurai, Tamil Nadu, India.
Mayilsamy MuniarajICMR-Vector Control Research Centre Field Station, Madurai, Tamil Nadu, India.
Binata NayakSambalpur University, Jyoti Vihar, Sambalpur, Odisha, 768019, India. binatanayak@suniv.ac.in.
Aparup DasICMR-National Institute of Research in Tribal Health, Jabalpur, Madhya Pradesh, India. aparupdas@nirth.res.in.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Aedes aegypti and Aedes albopictus mosquitoes spread major vector-borne viral diseases in tropical and sub-tropical regions of the globe. In this study, we sequenced the genome of Indian Ae. aegypti and Ae. albopictus and mapped to their reference genomes. Comparative genomics were performed between our strain and the reference strains. A total of 14,416,484 single nucleotide polymorphisms (SNPs) and 156,487 insertions and deletions (InDels) were found in Ae. aegypti, and 28,940,433 SNPs and 188,987 InDels in Ae. albopictus. Particular emphasis was given to gene families involved in mosquito digestion, development, and innate immunity, which could be putative candidates for vector control. Serine protease cascades and their inhibitors called serpins, play a central role in these processes. We extracted high-impact variants in genes associated with serine proteases and serpins. This study reports for the first time a high coverage genome sequence data of an Indian Ae. albopictus mosquito. The results from this study will provide insights into Indian Aedes specific polymorphisms and the evolution of immune related genes in mosquitoes, which can serve as a resource for future comparative genomics and those pursuing the development of targeted biopesticides for effective mosquito control strategies.

Indexed as

AedesMosquito VectorsPolymorphism, Single NucleotideAnimalsGenome, InsectGenomicsINDEL MutationIndiaWhole Genome SequencingAedesDengueDNA polymorphismGenomeSerine proteaseSerpin

Identifiers

PMID39358370
PMCPMC11447132

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