Evidence map›Paper›PMID 39356796›Full record

ArticleMolecular biology of the cell2024

G3BP isoforms differentially affect stress granule assembly and gene expression during cellular stress.

José M Liboy-Lugo, Carla A Espinoza, Jessica Sheu-Gruttadauria, Jesslyn E Park, Albert Xu, Ziad Jowhar, Angela L Gao, José A Carmona-Negrón, Torsten Wittmann, Natalia Jura and 1 more

Abstract read
In one paragraph

Article in Molecular biology of the cell, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

11 authors.

José M Liboy-LugoDepartment of Cell and Tissue Biology, University of California, San Francisco, San Francisco, CA 94143.
Carla A EspinozaTetrad Graduate Program, University of California, San Francisco, San Francisco, CA 94158.
Jessica Sheu-GruttadauriaDepartment of Cell and Tissue Biology, University of California, San Francisco, San Francisco, CA 94143.
Jesslyn E ParkDepartment of Cell and Tissue Biology, University of California, San Francisco, San Francisco, CA 94143.
Albert XuDepartment of Cell and Tissue Biology, University of California, San Francisco, San Francisco, CA 94143.
Ziad JowharDepartment of Cell and Tissue Biology, University of California, San Francisco, San Francisco, CA 94143.
Angela L GaoTetrad Graduate Program, University of California, San Francisco, San Francisco, CA 94158.
José A Carmona-NegrónCardiovascular Research Institute, University of California, San Francisco, San Francisco, CA 94158.
Torsten WittmannDepartment of Cell and Tissue Biology, University of California, San Francisco, San Francisco, CA 94143.
Natalia JuraCardiovascular Research Institute, University of California, San Francisco, San Francisco, CA 94158.
Stephen N FloorDepartment of Cell and Tissue Biology, University of California, San Francisco, San Francisco, CA 94143.

Funding

UCSF IRACDA Scholars ProgramK12GM081266 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI Raymond M. Esquerra, HOLLY A. INGRAHAM · 2007 to 2026
$19.4M
Medical Scientist Training Program (T32 NRSA Training Grant)T32GM141323 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI Aimee Kao · 2021 to 2026
$10.5M
Wide-field super-resolution spinning disk confocal microscopeS10OD028611 · OD · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI WITTMANN, TORSTEN · 2020 to 2020
$600k
Illumina NovaSeq 6000 Sequencing SystemS10OD028511 · OD · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI CHOW, ERIC D · 2020 to 2020
$583k
The molecular grammar of human RNA biologyR35GM149255 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI FLOOR, STEPHEN NICHOLAS · 2023 to 2024
$498k
Cytation 5 Multimode Imaging System for UPR at Mayaguez Biomolecular Chemistry FacilitiesS10AG090400 · NIA · UNIVERSITY OF PUERTO RICO MAYAGUEZ · PI CARMONA, JOSE A · 2024 to 2024
$245k
The role of G3BP granules in mRNA translation regulation and cell adaptation to exogenous stressF31GM143845 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI LIBOY, JOSE · 2021 to 2023
$125k
NIA NIH HHS S10 AG090400NIGMS NIH HHS F31 GM143845NIGMS NIH HHS K12 GM081266NIGMS NIH HHS R35 GM149255NIGMS NIH HHS T32 GM141323NIH HHS S10 OD028511NIH HHS S10 OD028611
6 · The paper itself

Abstract

Stress granules (SGs) are macromolecular assemblies that form under cellular stress. Formation of these membraneless organelles is driven by the condensation of RNA and RNA-binding proteins such as G3BPs. G3BPs form SGs following stress-induced translational arrest. Three G3BP paralogues (G3BP1, G3BP2A, and G3BP2B) have been identified in vertebrates. However, the contribution of different G3BP paralogues to SG formation and gene expression changes is incompletely understood. Here, we probed the functions of G3BPs by identifying important residues for SG assembly at their N-terminal domain such as V11. This conserved amino acid is required for formation of the G3BP-Caprin-1 complex, hence promoting SG assembly. Total RNA sequencing and ribosome profiling revealed that a G3BP

Indexed as

DNA HelicasesPoly-ADP-Ribose Binding ProteinsProtein IsoformsRNA-Binding ProteinsRNA HelicasesRNA Recognition Motif ProteinsStress GranulesAdaptor Proteins, Signal TransducingCarrier ProteinsCell Cycle ProteinsCytoplasmic GranulesEndoplasmic Reticulum StressGene ExpressionHEK293 CellsHeLa CellsHumansAdaptor Proteins, Signal TransducingCAPRIN1 protein, humanCarrier ProteinsCell Cycle ProteinsDNA HelicasesG3BP1 protein, humanG3BP2 protein, humanPoly-ADP-Ribose Binding ProteinsProtein IsoformsRNA-Binding ProteinsRNA HelicasesRNA Recognition Motif Proteins

Identifiers

PMID39356796
PMCPMC11617104

What OpenQuestion holds

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.