Evidence map›Paper›PMID 39354406›Full record

ArticleBMC cardiovascular disorders2024

Exploration of protein and genetic targets causing atrioventricular block: mendelian-randomization analyses based on eQTL data and pQTL data.

Tongyu Wang, Peipei Ma, Xiaofang Wang, Yunlong Xia

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Article in BMC cardiovascular disorders, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

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3citing papers in PubMed
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1 · What the graph read from it

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2 · The registry

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3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

4 authors.

Tongyu Wang *Department of cardiology, First affiliated hospital of Dalian Mediacal University, Liaoning, China.
Peipei Ma *Department of cardiology, First affiliated hospital of Dalian Mediacal University, Liaoning, China.
Xiaofang WangDepartment of Biochemiacal Informatics, School of Basic Mediacal Sciences, Peking University, Beijing, 100191, China.
Yunlong XiaDepartment of cardiology, First affiliated hospital of Dalian Mediacal University, Liaoning, China. dlmu_xiayunlong@163.com.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundAtrioventricular block (AVB) is a heterogeneous group of arrhythmias. AVB can lead to sudden arrest of the heart and subsequent syncope or sudden cardiac death. Few scholars have investigated the underlying molecular mechanisms of AVB. Finding molecular markers can facilitate understanding of AVB and exploration of therapeutic targets.

methodsTwo-sample Mendelian randomization (MR) analysis was undertaken with inverse variance weighted (IVW) model and Wald ratio as the primary approach. Reverse MR analysis was undertaken to identify the associated protein targets and gene targets. Expression quantitative trait loci (eQTL) data from the eQTLGen database and protein quantitative trait loci (pQTL) data from three previous large-scale proteomic studies on plasma were retrieved as exposure data. Genome-wide association study (GWAS) summary data (586 cases and 379,215 controls) for AVB were retrieved from the UK Biobank database. Colocalization analyses were undertaken to identify the effect of filtered markers on outcome data. Databases (DrugBank, Therapeutic Target, PubChem) were used to identify drugs that interacted with targets.

resultsWe discovered that 692 genes and 42 proteins showed a significant correlation with the AVB phenotype. Proteins (cadherin-5, sTie-1, Notch 1) and genes (DNAJC30, ABO) were putative molecules to AVB. Drug-interaction analyses revealed anticancer drugs such as tyrosine-kinase inhibitors and TIMD3 inhibitors could cause AVB. Other substances (e.g. toxins, neurological drugs) could also cause AVB.

conclusionsWe identified the proteins (cadherin-5, sTie-1, Notch 1) and gene (DNAJC30, ABO) targets associated with AVB pathogenesis. Anticancer drugs (tyrosine-kinase inhibitors, TIMD3 inhibitors), toxins, or neurological drugs could also cause AVB.

Indexed as

Atrioventricular BlockDatabases, GeneticGenetic Predisposition to DiseaseGenome-Wide Association StudyMendelian Randomization AnalysisPhenotypeQuantitative Trait LociHumansPolymorphism, Single NucleotideProteomicsRisk FactorsAtrioventricular blockDrug targetseQTLGene markersMendelian randomizationpQTLProtein markersReverse mendelian randomization

Identifiers

PMID39354406
PMCPMC11443760

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.