Evidence map›Paper›PMID 39354343›Full record

ArticleBMC plant biology2024

Transcriptomic and metabolomic analysis of poplar response to feeding by Hyphantria cunea.

Hanxi Li, Jiajia Shen, Yutong Ding, Yuxi Li, Jiayu Du, Tingbo Jiang, Xiangbo Kong, Rui Han, Xinxin Zhang, Xiyang Zhao

Abstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in BMC plant biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Transcriptomic and metabolomic data ofFrontiers in plant science · 2026
    Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Hanxi Li *Jilin Provincial Key Laboratory of Tree and Grass Genetics and Breeding, College of Forestry and Grassland, Jilin Agriculture University, Changchun, China.
Jiajia Shen *Jilin Provincial Key Laboratory of Tree and Grass Genetics and Breeding, College of Forestry and Grassland, Jilin Agriculture University, Changchun, China.
Yutong DingJilin Provincial Key Laboratory of Tree and Grass Genetics and Breeding, College of Forestry and Grassland, Jilin Agriculture University, Changchun, China.
Yuxi LiJilin Provincial Key Laboratory of Tree and Grass Genetics and Breeding, College of Forestry and Grassland, Jilin Agriculture University, Changchun, China.
Jiayu DuJilin Provincial Key Laboratory of Tree and Grass Genetics and Breeding, College of Forestry and Grassland, Jilin Agriculture University, Changchun, China.
Tingbo JiangState Key Laboratory of Tree Genetics and Breeding, Northeast Forestry University, Harbin, China.
Xiangbo KongKey Laboratory of Forest Protection of National Forestry and Grassland Administration, Ecology and Nature Conservation Institute, Chinese Academy of Forestry, Beijing, China.
Rui HanJilin Provincial Key Laboratory of Tree and Grass Genetics and Breeding, College of Forestry and Grassland, Jilin Agriculture University, Changchun, China.
Xinxin ZhangJilin Provincial Key Laboratory of Tree and Grass Genetics and Breeding, College of Forestry and Grassland, Jilin Agriculture University, Changchun, China. zxx2023@163.com.
Xiyang ZhaoJilin Provincial Key Laboratory of Tree and Grass Genetics and Breeding, College of Forestry and Grassland, Jilin Agriculture University, Changchun, China. zhaoxyphd@163.com.

Funding

technological innovation 2030-major project of agricultural biological breeding 2022ZD0401504
6 · The paper itself

Abstract

Populus cathayana × canadansis 'Xinlin 1' ('P.'xin lin 1') with the characteristics of rapid growth and high yield, is frequently attacked by herbivorous insects. However, little is known about how it defenses against Hyphantria cunea (H. cunea) at molecular and biochemical levels. Differences in the transcriptome and metabolome were analyzed after 'P. 'xin lin 1' leaves were fed to H. cunea for 0h, 2h, 4h, 8h, 16h and 24h. In the five comparison groups including 2h vs. CK, 4h vs. CK, 8h vs. CK, 16h vs. CK, and 24h vs. CK, a total of 8925 genes and 842 metabolites were differentially expressed. A total of 825 transcription factors (TFs) were identified, which encoded 56 TF families. The results showed that the top four families with the highest number of TFs were AP2/ERF, MYB, C2C2, bHLH. Analyses of leaves which were fed to H. cunea showed that the differentially expressed genes (DEGs) and differentially accumulated metabolites (DAMs) were significantly enriched in plant hormone signal transduction pathway, MAPK signaling pathway, flavonoid, flavone and flavonol and anthocyanin biosynthesis pathway. Additionally, there were a number of genes significantly up-regulated in MAPK signaling pathway. Some compounds involved in plant hormone signal transduction and flavonoid/flavone and flavonol/ anthocyanin pathways such as jasmonic acid (JA), jasmonoyl-L-Isoleucine (JA-Ile), kaempferol and cyanidin-3-O-glucoside were induced in infested 'P.'xin lin 1'. This study provides a new understanding for exploring the dynamic response mechanism of poplar to the infestation of H. cunea.

Indexed as

PopulusTranscriptomeAnimalsGene Expression ProfilingGene Expression Regulation, PlantHerbivoryMetabolomeMetabolomicsPlant LeavesPlant ProteinsTranscription FactorsPlant ProteinsTranscription FactorsHyphantria cuneaMetabolomicspopulusTranscriptomics

Identifiers

PMID39354343
PMCPMC11446030

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.