Evidence map›Paper›PMID 39354009›Full record

ArticleScientific reports2024

Brain tumor detection and classification in MRI using hybrid ViT and GRU model with explainable AI in Southern Bangladesh.

Md Mahfuz Ahmed, Md Maruf Hossain, Md Rakibul Islam, Md Shahin Ali, Abdullah Al Noman Nafi, Md Faisal Ahmed, Kazi Mowdud Ahmed, Md Sipon Miah, Md Mahbubur Rahman, Mingbo Niu and 1 more

Abstract read
In one paragraph

Article in Scientific reports, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Md Mahfuz AhmedShaanxi Int'l Innovation Center for Transportation-Energy-Information Fusion and Sustainability, Chang'an University, Xi'an, 710064, China.
Md Maruf HossainDepartment of Biomedical Engineering, Islamic University, 7003, Kushtia, Bangladesh.
Md Rakibul IslamBio-Imaging Research Lab, Islamic University, 7003, Kushtia, Bangladesh.
Md Shahin AliDepartment of Biomedical Engineering, Islamic University, 7003, Kushtia, Bangladesh.
Abdullah Al Noman NafiDepartment of Information and Communication Technology, Islamic University, 7003, Kushtia, Bangladesh.
Md Faisal AhmedShip International Hospital, 1230, Uttara, Dhaka, Bangladesh.
Kazi Mowdud AhmedDepartment of Information and Communication Technology, Islamic University, 7003, Kushtia, Bangladesh.
Md Sipon MiahShaanxi Int'l Innovation Center for Transportation-Energy-Information Fusion and Sustainability, Chang'an University, Xi'an, 710064, China.
Md Mahbubur RahmanDepartment of Information and Communication Technology, Islamic University, 7003, Kushtia, Bangladesh.
Mingbo NiuShaanxi Int'l Innovation Center for Transportation-Energy-Information Fusion and Sustainability, Chang'an University, Xi'an, 710064, China. ivr.niu@chd.edu.cn.
Md Khairul IslamDepartment of Biomedical Engineering, Islamic University, 7003, Kushtia, Bangladesh.

Funding

The High-Level Talent Projects of Shaanxi and Central Universities 300201000156The Innovation Creative Center Project of Shaanxi Province 300201000173The Ministry of Science and Technology of China G2021171024L
6 · The paper itself

Abstract

Brain tumor, a leading cause of uncontrolled cell growth in the central nervous system, presents substantial challenges in medical diagnosis and treatment. Early and accurate detection is essential for effective intervention. This study aims to enhance the detection and classification of brain tumors in Magnetic Resonance Imaging (MRI) scans using an innovative framework combining Vision Transformer (ViT) and Gated Recurrent Unit (GRU) models. We utilized primary MRI data from Bangabandhu Sheikh Mujib Medical College Hospital (BSMMCH) in Faridpur, Bangladesh. Our hybrid ViT-GRU model extracts essential features via ViT and identifies relationships between these features using GRU, addressing class imbalance and outperforming existing diagnostic methods. We extensively processed the dataset, and then trained the model using various optimizers (SGD, Adam, AdamW) and evaluated through rigorous 10-fold cross-validation. Additionally, we incorporated Explainable Artificial Intelligence (XAI) techniques-Attention Map, SHAP, and LIME-to enhance the interpretability of the model's predictions. For the primary dataset BrTMHD-2023, the ViT-GRU model achieved precision, recall, and F1-score metrics of 97%. The highest accuracies obtained with SGD, Adam, and AdamW optimizers were 81.66%, 96.56%, and 98.97%, respectively. Our model outperformed existing Transfer Learning models by 1.26%, as validated through comparative analysis and cross-validation. The proposed model also shows excellent performances with another Brain Tumor Kaggle Dataset outperforming the existing research done on the same dataset with 96.08% accuracy. The proposed ViT-GRU framework significantly improves the detection and classification of brain tumors in MRI scans. The integration of XAI techniques enhances the model's transparency and reliability, fostering trust among clinicians and facilitating clinical application. Future work will expand the dataset and apply findings to real-time diagnostic devices, advancing the field.

Indexed as

Brain NeoplasmsMagnetic Resonance ImagingAlgorithmsArtificial IntelligenceBangladeshHumansImage Interpretation, Computer-AssistedAttention mapBrain tumorDeep learningExplainable Artificial IntelligencePre-processingViT-GRU

Identifiers

PMID39354009
PMCPMC11445444

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.