Evidence map›Paper›PMID 39353942›Full record

ArticleNature communications2024

Phytochrome-dependent responsiveness to root-derived cytokinins enables coordinated elongation responses to combined light and nitrate cues.

Pierre Gautrat, Sara Buti, Andrés Romanowski, Michiel Lammers, Sanne E A Matton, Guido Buijs, Ronald Pierik

Abstract read
In one paragraph

Article in Nature communications, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Pierre GautratPlant-Environment Signaling, Institute of Environmental Biology, Utrecht University, Utrecht, The Netherlands. pierre.gautrat@gmail.com.ORCID 0000-0003-1476-686X
Sara ButiPlant-Environment Signaling, Institute of Environmental Biology, Utrecht University, Utrecht, The Netherlands.ORCID 0000-0003-4879-2265
Andrés RomanowskiPlant-Environment Signaling, Institute of Environmental Biology, Utrecht University, Utrecht, The Netherlands.ORCID 0000-0003-0737-2408
Michiel LammersLaboratory of Molecular Biology, Wageningen University, Wageningen, The Netherlands.
Sanne E A MattonLaboratory of Molecular Biology, Wageningen University, Wageningen, The Netherlands.ORCID 0009-0009-9676-1528
Guido BuijsPlant-Environment Signaling, Institute of Environmental Biology, Utrecht University, Utrecht, The Netherlands.
Ronald PierikPlant-Environment Signaling, Institute of Environmental Biology, Utrecht University, Utrecht, The Netherlands. ronald.pierik@wur.nl.ORCID 0000-0002-5320-6817

Funding

EC | Horizon 2020 Framework Programme (EU Framework Programme for Research and Innovation H2020) 101026742European Molecular Biology Organization (EMBO) ALTF 828-2020Nederlandse Organisatie voor Wetenschappelijk Onderzoek (Netherlands Organisation for Scientific Research) Vici 865.17.002
6 · The paper itself

Abstract

Plants growing at high densities can detect competitors through changes in the composition of light reflected by neighbours. In response to this far-red-enriched light, plants elicit adaptive shade avoidance responses for light capture, but these need to be balanced against other input signals, such as nutrient availability. Here, we investigated how Arabidopsis integrates shade and nitrate signalling. We unveiled that nitrate modulates shade avoidance via a previously unknown shade response pathway that involves root-derived trans-zeatin (tZ) signal and the BEE1 transcription factor as an integrator of light and cytokinin signalling. Under nitrate-sufficient conditions, tZ promotes hypocotyl elongation specifically in the presence of supplemental far-red light. This occurs via PIF transcription factors-dependent inhibition of type-A ARRs cytokinin response inhibitors. Our data thus reveal how plants co-regulate responses to shade cues with root-derived information about nutrient availability, and how they restrict responses to this information to specific light conditions in the shoot.

Indexed as

ArabidopsisArabidopsis ProteinsCytokininsGene Expression Regulation, PlantLightNitratesPhytochromePlant RootsSignal TransductionHypocotylTranscription FactorsZeatinArabidopsis ProteinsCytokininsNitratesPhytochromeTranscription FactorsZeatin

Identifiers

PMID39353942
PMCPMC11445486

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.