Evidence map›Paper›PMID 39353893›Full record

ArticleNature communications2024

The genetic landscape of basal ganglia and implications for common brain disorders.

Shahram Bahrami, Kaja Nordengen, Jaroslav Rokicki, Alexey A Shadrin, Zillur Rahman, Olav B Smeland, Piotr P Jaholkowski, Nadine Parker, Pravesh Parekh, Kevin S O'Connell and 7 more

Abstract read
In one paragraph

Article in Nature communications, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Review
  9. From Stress to Synapse: The Neuronal Atrophy Pathway to Mood Dysregulation.International journal of molecular sciences · 2025
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors.

Shahram Bahrami *Institute of Clinical Medicine, University of Oslo, Oslo, Norway. shahram.bahrami@medisin.uio.no.ORCID 0000-0002-8179-2788
Kaja Nordengen *Institute of Clinical Medicine, University of Oslo, Oslo, Norway.ORCID 0000-0002-5897-6394
Jaroslav RokickiCentre of Research and Education in Forensic Psychiatry, Oslo University Hospital, Oslo, Norway.
Alexey A ShadrinInstitute of Clinical Medicine, University of Oslo, Oslo, Norway.
Zillur RahmanKG Jebsen Centre for Neurodevelopmental disorders, University of Oslo, Oslo, Norway.
Olav B SmelandInstitute of Clinical Medicine, University of Oslo, Oslo, Norway.ORCID 0000-0002-3761-5215
Piotr P JaholkowskiInstitute of Clinical Medicine, University of Oslo, Oslo, Norway.
Nadine ParkerInstitute of Clinical Medicine, University of Oslo, Oslo, Norway.ORCID 0000-0002-8369-0152
Pravesh ParekhInstitute of Clinical Medicine, University of Oslo, Oslo, Norway.ORCID 0000-0002-1930-1167
Kevin S O'ConnellInstitute of Clinical Medicine, University of Oslo, Oslo, Norway.
Torbjørn ElvsåshagenInstitute of Clinical Medicine, University of Oslo, Oslo, Norway.ORCID 0000-0001-9991-1610
Mathias ToftInstitute of Clinical Medicine, University of Oslo, Oslo, Norway.
Srdjan DjurovicInstitute of Clinical Medicine, University of Oslo, Oslo, Norway.ORCID 0000-0002-8140-8061
Anders M DaleMultimodal Imaging Laboratory, University of California San Diego, La Jolla, CA, USA.ORCID 0000-0002-6126-2966
Lars T WestlyeInstitute of Clinical Medicine, University of Oslo, Oslo, Norway.ORCID 0000-0001-8644-956X
Tobias KaufmannInstitute of Clinical Medicine, University of Oslo, Oslo, Norway.ORCID 0000-0002-4003-1018
Ole A AndreassenInstitute of Clinical Medicine, University of Oslo, Oslo, Norway. ole.andreassen@medisin.uio.no.ORCID 0000-0002-4461-3568

Funding

ENIGMA Bipolar Initiative: A Global Study of Imaging Genomics & Clinical OutcomesR01MH129742 · NIMH · UNIVERSITY OF SOUTHERN CALIFORNIA · PI Christopher Ching, PAUL M THOMPSON · 2022 to 2026
$3.0M
NIMH NIH HHS R01 MH129742
6 · The paper itself

Abstract

The basal ganglia are subcortical brain structures involved in motor control, cognition, and emotion regulation. We conducted univariate and multivariate genome-wide association analyses (GWAS) to explore the genetic architecture of basal ganglia volumes using brain scans obtained from 34,794 Europeans with replication in 4,808 white and generalization in 5,220 non-white Europeans. Our multivariate GWAS identified 72 genetic loci associated with basal ganglia volumes with a replication rate of 55.6% at P < 0.05 and 87.5% showed the same direction, revealing a distributed genetic architecture across basal ganglia structures. Of these, 50 loci were novel, including exonic regions of APOE, NBR1 and HLAA. We examined the genetic overlap between basal ganglia volumes and several neurological and psychiatric disorders. The strongest genetic overlap was between basal ganglia and Parkinson's disease, as supported by robust LD-score regression-based genetic correlations. Mendelian randomization indicated genetic liability to larger striatal volume as potentially causal for Parkinson's disease, in addition to a suggestive causal effect of greater genetic liability to Alzheimer's disease on smaller accumbens. Functional analyses implicated neurogenesis, neuron differentiation and development in basal ganglia volumes. These results enhance our understanding of the genetic architecture and molecular associations of basal ganglia structure and their role in brain disorders.

Indexed as

Basal GangliaGenome-Wide Association StudyParkinson DiseaseAdultAgedAlzheimer DiseaseBrain DiseasesFemaleGenetic Predisposition to DiseaseHumansMaleMendelian Randomization AnalysisMiddle AgedPolymorphism, Single NucleotideWhite People

Identifiers

PMID39353893
PMCPMC11445552

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.