Evidence map›Paper›PMID 39353889›Full record

ArticleNature communications2024

Cryo-EM structures of the human P2X1 receptor reveal subtype-specific architecture and antagonism by supramolecular ligand-binding.

Adam C Oken, Nicolas E Lisi, Ismayn A Ditter, Haoyuan Shi, Nadia A Nechiporuk, Steven E Mansoor

Abstract read
In one paragraph

Article in Nature communications, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

  1. Article
  2. Advances in nucleotide-based P2Y₁ antagonism: implications for cardiovascular therapeutics.Medicinal chemistry research : an international journal for rapid communications on design and mechanisms of action of biologically active agents · 2026
    Review
  3. Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. Subtype-specific structural features of the hearing loss-associated human P2X2 receptor.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  11. Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Adam C Oken *Department of Chemical Physiology & Biochemistry, Oregon Health & Science University, Portland, OR, 97239, USA.ORCID 0000-0002-8661-9888
Nicolas E Lisi *Department of Chemical Physiology & Biochemistry, Oregon Health & Science University, Portland, OR, 97239, USA.
Ismayn A Ditter *Department of Chemical Physiology & Biochemistry, Oregon Health & Science University, Portland, OR, 97239, USA.ORCID 0000-0001-5814-2026
Haoyuan Shi *Department of Chemical Physiology & Biochemistry, Oregon Health & Science University, Portland, OR, 97239, USA.ORCID 0000-0002-1822-6230
Nadia A NechiporukDepartment of Chemical Physiology & Biochemistry, Oregon Health & Science University, Portland, OR, 97239, USA.
Steven E MansoorDepartment of Chemical Physiology & Biochemistry, Oregon Health & Science University, Portland, OR, 97239, USA. mansoors@ohsu.edu.ORCID 0000-0001-9606-8955

Funding

Pacific Northwest Center for Cryo-EM - Screening supplementU24GM129547 · NIGMS · OREGON HEALTH & SCIENCE UNIVERSITY · PI EVANS, JAMES E, GOUAUX, JAMES E · 2018 to 2023
$54.8M
Elucidation of P2X7 Receptor Signaling and Development of Novel Small Molecule and Aptamer Ligand TherapiesDP2GM149551 · NIGMS · OREGON HEALTH & SCIENCE UNIVERSITY · PI MANSOOR, STEVEN ELIAS · 2022 to 2025
$2.3M
Structure/Function Studies on the Mechanisms of Purinergic Receptor Activation and AntagonismR00HL138129 · NHLBI · OREGON HEALTH & SCIENCE UNIVERSITY · PI MANSOOR, STEVEN ELIAS · 2020 to 2022
$746k
American Heart Association (American Heart Association, Inc.) 24PRE1195450NHLBI NIH HHS R00 HL138129NIGMS NIH HHS DP2 GM149551NIGMS NIH HHS U24 GM129547U.S. Department of Health & Human Services | NIH | National Heart, Lung, and Blood Institute (NHLBI) R00HL138129U.S. Department of Health & Human Services | NIH | National Institute of General Medical Sciences (NIGMS) DP2GM149551
6 · The paper itself

Abstract

P2X receptors are a family of seven trimeric non-selective cation channels that are activated by extracellular ATP to play roles in the cardiovascular, neuronal, and immune systems. Although it is known that the P2X1 receptor subtype has increased sensitivity to ATP and fast desensitization kinetics, an underlying molecular explanation for these subtype-selective features is lacking. Here we report high-resolution cryo-EM structures of the human P2X1 receptor in the apo closed, ATP-bound desensitized, and the high-affinity antagonist NF449-bound inhibited states. The apo closed and ATP-bound desensitized state structures of human P2X1 define subtype-specific properties such as distinct pore architecture and ATP-interacting residues. The NF449-bound inhibited state structure of human P2X1 reveals that NF449 has a unique dual-ligand supramolecular binding mode at the interface of neighboring protomers, inhibiting channel activation by overlapping with the canonical P2X receptor ATP-binding site. Altogether, these data define the molecular pharmacology of the human P2X1 receptor laying the foundation for structure-based drug design.

Indexed as

Cryoelectron MicroscopyPurinergic P2X Receptor AntagonistsReceptors, Purinergic P2X1Adenosine TriphosphateBenzenesulfonatesBinding SitesHEK293 CellsHumansLigandsModels, MolecularProtein Binding4,4,',4'',4'''-(carbonylbis(imino-5,1,3-benzenetriylbis(carbonylimino)))tetrakis(benzene-1,3-disulfonate)Adenosine TriphosphateBenzenesulfonatesLigandsPurinergic P2X Receptor AntagonistsReceptors, Purinergic P2X1

Identifiers

PMID39353889
PMCPMC11448502

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.