Evidence map›Paper›PMID 39353335›Full record

ArticleMedical image analysis2025

A Flow-based Truncated Denoising Diffusion Model for super-resolution Magnetic Resonance Spectroscopic Imaging.

Siyuan Dong, Zhuotong Cai, Gilbert Hangel, Wolfgang Bogner, Georg Widhalm, Yaqing Huang, Qinghao Liang, Chenyu You, Chathura Kumaragamage, Robert K Fulbright and 5 more

Abstract read
In one paragraph

Article in Medical image analysis, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Review
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Siyuan DongDepartment of Electrical Engineering, Yale University, New Haven, CT, USA. Electronic address: s.dong@yale.edu.
Zhuotong CaiDepartment of Biomedical Engineering, Yale University, New Haven, CT, USA; Institute of Artificial Intelligence and Robotics, Xi'an Jiaotong University, Xi'an, China. Electronic address: zhuotong.cai@yale.edu.
Gilbert HangelDepartment of Biomedical Imaging and Image-Guided Therapy, Highfield MR Center, Medical University of Vienna, Vienna, Austria; Department of Neurosurgery, Medical University of Vienna, Vienna, Austria.
Wolfgang BognerDepartment of Biomedical Imaging and Image-Guided Therapy, Highfield MR Center, Medical University of Vienna, Vienna, Austria.
Georg WidhalmDepartment of Neurosurgery, Medical University of Vienna, Vienna, Austria.
Yaqing HuangDepartment of Pathology, Yale University, New Haven, CT, USA.
Qinghao LiangDepartment of Biomedical Engineering, Yale University, New Haven, CT, USA.
Chenyu YouDepartment of Electrical Engineering, Yale University, New Haven, CT, USA.
Chathura KumaragamageDepartment of Radiology and Biomedical Imaging, Yale University, New Haven, CT, USA.
Robert K FulbrightDepartment of Radiology and Biomedical Imaging, Yale University, New Haven, CT, USA.
Amit MahajanDepartment of Radiology and Biomedical Imaging, Yale University, New Haven, CT, USA.
Amin KarbasiDepartment of Electrical Engineering, Yale University, New Haven, CT, USA; Department of Computer Science, Yale University, New Haven, CT, USA; Department of Statistics and Data Science, Yale University, New Haven, CT, USA.
John A OnofreyDepartment of Radiology and Biomedical Imaging, Yale University, New Haven, CT, USA.
Robin A de GraafDepartment of Biomedical Engineering, Yale University, New Haven, CT, USA; Department of Radiology and Biomedical Imaging, Yale University, New Haven, CT, USA.
James S DuncanDepartment of Electrical Engineering, Yale University, New Haven, CT, USA; Department of Biomedical Engineering, Yale University, New Haven, CT, USA; Department of Radiology and Biomedical Imaging, Yale University, New Haven, CT, USA. Electronic address: james.duncan@yale.edu.

Funding

Yale Clinical and Translational Science Award (U Component)UL1TR001863 · NCATS · YALE UNIVERSITY · PI John H. Krystal, LUCILA OHNO-MACHADO · 2016 to 2026
$102.9M
Subnetwork-based Quantitative Imaging Biomarkers for Therapy Assessment in AutismR01NS035193 · NINDS · YALE UNIVERSITY · PI JAMES S DUNCAN, LAWRENCE H. STAIB · 1996 to 2026
$9.2M
Quantitative Multimodal Imaging Biomarkers for Combined Locoregional and Immunotherapy of Liver CancerR01CA206180 · NCI · YALE UNIVERSITY · PI CHAPIRO, JULIUS, DUNCAN, JAMES S · 2016 to 2025
$6.1M
Deuterium metabolic imaging (DMI) of neurological diseaseR01EB025840 · NIBIB · YALE UNIVERSITY · PI ROBIN A DE GRAAF, Henk De Feyter · 2019 to 2026
$4.2M
NCATS NIH HHS UL1 TR001863NCI NIH HHS R01 CA206180NIBIB NIH HHS R01 EB025840NINDS NIH HHS R01 NS035193
6 · The paper itself

Abstract

Magnetic Resonance Spectroscopic Imaging (MRSI) is a non-invasive imaging technique for studying metabolism and has become a crucial tool for understanding neurological diseases, cancers and diabetes. High spatial resolution MRSI is needed to characterize lesions, but in practice MRSI is acquired at low resolution due to time and sensitivity restrictions caused by the low metabolite concentrations. Therefore, there is an imperative need for a post-processing approach to generate high-resolution MRSI from low-resolution data that can be acquired fast and with high sensitivity. Deep learning-based super-resolution methods provided promising results for improving the spatial resolution of MRSI, but they still have limited capability to generate accurate and high-quality images. Recently, diffusion models have demonstrated superior learning capability than other generative models in various tasks, but sampling from diffusion models requires iterating through a large number of diffusion steps, which is time-consuming. This work introduces a Flow-based Truncated Denoising Diffusion Model (FTDDM) for super-resolution MRSI, which shortens the diffusion process by truncating the diffusion chain, and the truncated steps are estimated using a normalizing flow-based network. The network is conditioned on upscaling factors to enable multi-scale super-resolution. To train and evaluate the deep learning models, we developed a

Indexed as

Deep LearningAlgorithmsBrainBrain NeoplasmsHumansImage Processing, Computer-AssistedMagnetic Resonance ImagingMagnetic Resonance SpectroscopySignal-To-Noise RatioDiffusion ModelsMR Spectroscopic ImagingNormalizing FlowSuper-resolution

Identifiers

PMID39353335
PMCPMC11609020

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.