Evidence map›Paper›PMID 39351303›Full record

ArticleFrontiers in microbiology2024

Development of a visual detection method of porcine deltacoronavirus using loop-mediated isothermal amplification.

Renfeng Li, Wenyan Cao, Jiakang Yuan, Linyue Li, Yanlin Zhou, Fangyu Wang, Ziliang Wang, Xiangqin Tian

Abstract read
In one paragraph

Article in Frontiers in microbiology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Renfeng Li *College of Animal Science and Veterinary Medicine, Henan Institute of Science and Technology, Xinxiang, China.
Wenyan Cao *College of Animal Science and Veterinary Medicine, Henan Institute of Science and Technology, Xinxiang, China.
Jiakang YuanCollege of Animal Science and Veterinary Medicine, Henan Institute of Science and Technology, Xinxiang, China.
Linyue LiCollege of Animal Science and Veterinary Medicine, Henan Institute of Science and Technology, Xinxiang, China.
Yanlin ZhouSanquan College of Xinxiang Medical University, Xinxiang, China.
Fangyu WangKey Laboratory of Animal Immunology of the Ministry of Agriculture, Henan Provincial Key Laboratory of Animal Immunology, Henan Academy of Agricultural Sciences, Zhengzhou, China.
Ziliang WangCollege of Animal Science and Veterinary Medicine, Henan Institute of Science and Technology, Xinxiang, China.
Xiangqin TianHenan Key Laboratory of Medical Tissue Regeneration, Xinxiang Medical University, Xinxiang, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The emergence of porcine deltacoronavirus (PDCoV) presents a significant threat to both human and animal health due to its ability to cause highly contagious enteric diseases. This underscores the crucial need for timely and accurate diagnosis to facilitate effective epidemiological investigation and clinical management. This research aimed to establish a visual detection method based on reverse transcription loop-mediated isothermal amplification (RT-LAMP) for PDCoV testing. In this study, six pairs of primers were designed according to the conserved sequences of PDCoV ORF1a/b genes. The primer sets and parameters that affect LAMP reaction were optimized. The visual RT-LAMP method was developed by incorporating methyl red into the optimized reaction system, it exclusively detected PDCoV without cross-reactivity with other viruses and the detection limits for PDCoV could reach 10 copies/μL. In comparison with RT-PCR for testing 132 clinical samples, the relative specificity and sensitivity of the visual RT-LAMP were found to be 99.2 and 100%, respectively, with a concordance rate of 99.2% and a kappa value of 0.959, indicating that the visual RT-LAMP is a reliable method for the application of PDCoV detection in clinical samples.

Indexed as

deltacoronavirusdetectionloop-mediated isothermal amplificationporcinevisualization

Identifiers

PMID39351303
PMCPMC11439776

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.