Evidence map›Paper›PMID 39350059›Full record

ArticleBMC cancer2024

Role and molecular mechanisms of HuangQiSiJunZi decoction for treating triple-negative breast cancer as explored via network pharmacology and bioinformatics analyses.

Decai Wang, Dongqing Xie, Shuai Meng, Jiwei Mi, Haiming Wang, Lingsheng Li, Yin Zhang, Yixin Cui

Abstract read
In one paragraph

Article in BMC cancer, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

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4 · The record

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PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Decai WangAerospace Center Hospital, Beijing, 100049, China.
Dongqing Xie *Ultrasound Diagnosis Department, The First Medical Center of PLA General Hospital, Beijing, 100853, China.
Shuai Meng *Department of Traditional Chinese Medicine, The Sixth Medical Center of PLA General Hospital, Beijing, 100048, China.
Jiwei MiDepartment of Neurology, The Central People's Hospital, Zhanjiang, Guangdong, 524037, China.
Haiming WangDepartment of Traditional Chinese Medicine, The Sixth Medical Center of PLA General Hospital, Beijing, 100048, China.
Lingsheng LiDepartment of Traditional Chinese Medicine, The Sixth Medical Center of PLA General Hospital, Beijing, 100048, China.
Yin ZhangDepartment of Traditional Chinese Medicine, The Sixth Medical Center of PLA General Hospital, Beijing, 100048, China. zhangyin@301hospital.com.cn.
Yixin CuiDepartment of Traditional Chinese Medicine, The Sixth Medical Center of PLA General Hospital, Beijing, 100048, China. cuiyixin@301hospital.com.cn.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

objectiveIn this study, we evaluated the molecular mechanisms of HuangQiSiJunZi Decoction (HQSJZD) for treating triple-negative breast cancer (TNBC) using network pharmacology and bioinformatics analyses.

methodsEffective chemical components together with action targets of HQSJZD were selected based on the Traditional Chinese Medicine Systems Pharmacology Database and Analysis Platform (TCMSP). Meanwhile, differentially expressed genes (DEGs) were extracted from TNBC sample data in The Cancer Genome Atlas (TCGA) database. Additionally, we built a protein-protein interaction (PPI) network and acquired hub genes. Gene Expression Omnibus(GEO) datasets were utilized to verify the accuracy of hub gene expression. Additionally, enrichment analyses were conducted on key genes. Furthermore, TNBC severity-related high-risk factors were screened through univariate together with multivariate Cox regressions; next, the logistic regression prediction model was built. Moreover, differential levels of 22 immune cell types in TNBC tissues compared with normal tissues were analyzed. The hub gene levels within pan-cancer and the human body were subsequently visualized and analyzed. Finally, quantitative PCR (RT-qPCR) was used to validate the correlation of the hub genes in TNBC cells.

resultsThe study predicted 256 targets of active ingredients and 1791 DEGs in TNBC, and obtained 16 hub genes against TNBC. The prognostic signature based on FOS, MMP9, and PGR was independent in predicting survival. A total of seven types of immune cells, such as CD4 + memory T cells, showed a significant difference in infiltration (p < 0.05), and immune cells were related to the hub genes. The HPA database was adopted for hub gene analyses, and as determined, FOS was highly expressed in most human organs. The results of RT-qPCR validation for the FOS hub gene were consistent with those of bioinformatic analyses.

conclusionHQSJZD might regulate the interleukin-17 and aging pathways via FOS genes to increase immune cell infiltration in TNBC tissues, and thus, may treat TNBC and improve the prognosis. The FOS genes are likely to be a new marker for TNBC.

Indexed as

Computational BiologyDrugs, Chinese HerbalGene Expression Regulation, NeoplasticNetwork PharmacologyProtein Interaction MapsTriple Negative Breast NeoplasmsFemaleGene Expression ProfilingGene Regulatory NetworksHumansPrognosisProto-Oncogene Proteins c-fosDrugs, Chinese HerbalProto-Oncogene Proteins c-fosBioinformatics analysesHuangQiSiJunZi decoctionMedicinal herbNetwork pharmacologyTriple-negative breast cancer

Identifiers

PMID39350059
PMCPMC11443913

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.