Evidence map›Paper›PMID 39346078›Full record

ArticlePeerJ2024

Identification of a novel immune infiltration-related gene signature,

Wei Ye, Bo Shen, Qizhu Tang, Chengzhi Fang, Lei Wang, Lili Xie, Qi He

Abstract read
In one paragraph

Article in PeerJ, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Wei YeDepartment of Neonatology, Renmin Hospital of Wuhan University, Wuhan, China.
Bo ShenDepartment of Cardiology, Renmin Hospital of Wuhan University, Wuhan, China.
Qizhu TangDepartment of Cardiology, Renmin Hospital of Wuhan University, Wuhan, China.
Chengzhi FangDepartment of Neonatology, Renmin Hospital of Wuhan University, Wuhan, China.
Lei WangDepartment of Cardiology, HanChuan Hospital, Hanchuan, China.
Lili XieDepartment of Neonatology, Renmin Hospital of Wuhan University, Wuhan, China.
Qi HeDepartment of Neonatology, Renmin Hospital of Wuhan University, Wuhan, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: This study aims to identify a novel gene signature for coronary artery disease (CAD), explore the role of immune cell infiltration in CAD pathogenesis, and assess the cell function of mast cell-expressed membrane protein 1 ( Methods: To identify differentially expressed genes (DEGs) of CAD, datasets GSE24519 and GSE61145 were downloaded from the Gene Expression Omnibus (GEO) database using the R "limma" package with Results: A total of 73 DEGs (four down-regulated genes and 69 up-regulated genes) were identified in the metadata (GSE24519 and GSE61145) cohort. GO and Kyoto Encyclopedia of Genes and Genomes (KEGG) analysis results indicated that these DEGs might be associated with the regulation of platelet aggregation, defense response or response to bacterium, NF-kappa B signaling pathway, and lipid and atherosclerosis. Using SVM-RFE and LASSO, seven hub genes were obtained from the metadata. The upregulated expression of Conclusions: The results of this study indicate that

Indexed as

Coronary Artery DiseaseHuman Umbilical Vein Endothelial CellsLipoproteins, LDLApoptosisCell ProliferationGene Expression ProfilingHumansMembrane ProteinsLipoproteins, LDLMembrane Proteinsoxidized low density lipoproteinCoronary artery diseaseImmune cell infiltrationMachine learning algorithmMCEMP1ox-LDL treatment HUVECs cells

Identifiers

PMID39346078
PMCPMC11438437

What OpenQuestion holds

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LicenceCC BY-NC
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.