Evidence map›Paper›PMID 39345727›Full record

ArticleOne health (Amsterdam, Netherlands)2024

The genomic diversity and antimicrobial resistance of Non-typhoidal

Jaspreet Mahindroo, Duy Pham Thanh, Harpreet Kaur, To Nguyen Thi Nguyen, Trang Hoang Thu Nguyen, Megan E Carey, Ritu Verma, Balvinder Mohan, Siddhartha Thakur, Stephen Baker and 1 more

Abstract read
In one paragraph

Article in One health (Amsterdam, Netherlands), 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Enhancing surveillance of foodborne bacteria and antimicrobial resistance using a large centralized laboratory database: Case study of Campylobacter and nontyphoidal Salmonella in Peru.International journal of infectious diseases : IJID : official publication of the International Society for Infectious Diseases · 2026
    Article
  2. Article
  3. International journal of molecular sciences · 2026
    Article
  4. Article
  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Jaspreet MahindrooDepartment of Medical Microbiology, Post Graduate Institute of Medical Education and Research, Chandigarh, India.
Duy Pham ThanhOxford University Clinical Research Unit, Wellcome Trust Major Overseas Programme, Ho Chi Minh City, Viet Nam.
Harpreet KaurDepartment of Medical Microbiology, Post Graduate Institute of Medical Education and Research, Chandigarh, India.
To Nguyen Thi Nguyen
Trang Hoang Thu NguyenOxford University Clinical Research Unit, Wellcome Trust Major Overseas Programme, Ho Chi Minh City, Viet Nam.
Megan E CareyDepartment of Infection Biology, London School of Hygiene & Tropical Medicine, London, UK.
Ritu VermaDepartment of Medical Microbiology, Post Graduate Institute of Medical Education and Research, Chandigarh, India.
Balvinder MohanDepartment of Medical Microbiology, Post Graduate Institute of Medical Education and Research, Chandigarh, India.
Siddhartha ThakurCollege of Veterinary Medicine, North Carolina State University, Raleigh, NC, USA.
Stephen BakerCambridge Institute of Therapeutic Immunology and Infectious Disease (CITIID), Department of Medicine, University of Cambridge, Cambridge, United Kingdom.
Neelam TanejaDepartment of Medical Microbiology, Post Graduate Institute of Medical Education and Research, Chandigarh, India.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Introduction: Non-typhoidal Gap statement: Due to a lack of surveillance, there is limited information on the distribution of NTS serovars in India. Aim: Here, we investigated the epidemiology, sequence types, serovar distribution, phylogenetic relatedness, and antimicrobial resistance patterns of NTS in humans and animals across a large geographic area in Northern India. Methodology: We collected stool samples from patients with diarrhea who presented to 14 laboratories in Chandigarh and from five states in India (Punjab, Haryana, Uttarakhand, Himachal Pradesh, and Rajasthan). We sequenced the genomes and analyzed 117 NTS organisms isolated from humans and animals. Minimum inhibitory concentrations (MICs) were estimated using a Vitek2 system. Results: The prevalence of NTS in participants presenting to our study with diarrhea was 1.28 %, affecting all age groups. All NTS caused moderate to severe diarrhea. We found a high diversity of serovars with considerable serovar and sequence types (STs) overlap and phylogenetic closeness between isolates from human infections and food animals. We report serovars such as Conclusions: This study provides information on AMR genes and plasmid replicons associated with different serovars and highlights the role of food animals in AMR dissemination in our region.

Indexed as

Antimicrobial resistanceHuman-animal interfaceIndiaMLSTNon-typhoidal SalmonellaWhole genome sequencing

Identifiers

PMID39345727
PMCPMC11439553

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.