Evidence map›Paper›PMID 39345432›Full record

ArticlebioRxiv : the preprint server for biology2025

p53 Regulates Nuclear Architecture to Reduce Carcinogen Sensitivity and Mutagenic Potential.

Devin A King, Dakota E McCoy, Soumil Ghosh, Adrian Perdyan, Jakub Mieczkowski, Thierry Douki, Jennifer A Dionne, Rafael E Herrera, Ashby J Morrison

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Devin A KingDepartment of Biology, Stanford University, Stanford, California 94305, USA.
Dakota E McCoyDepartment of Materials Science and Engineering, Stanford University, Stanford, California 94305, USA.
Soumil GhoshDepartment of Biology, Stanford University, Stanford, California 94305, USA.
Adrian Perdyan3P-Medicine Laboratory, Medical University of Gdansk, 80-210 Gdansk, Poland.
Jakub Mieczkowski3P-Medicine Laboratory, Medical University of Gdansk, 80-210 Gdansk, Poland.
Thierry DoukiUniv. Grenoble Alpes, CEA, CNRS, Grenoble INP, IRIG, SyMMES, F-38000 Grenoble, France.
Jennifer A DionneDepartment of Materials Science and Engineering, Stanford University, Stanford, California 94305, USA.ORCID 0000-0001-5287-4357
Rafael E HerreraDepartment of Biology, Stanford University, Stanford, California 94305, USA.
Ashby J MorrisonDepartment of Biology, Stanford University, Stanford, California 94305, USA.ORCID 0000-0003-1228-5093

Funding

The Influence of Myc on Chromatin and Genome Stability during CarcinogenesisR21CA171050 · NCI · STANFORD UNIVERSITY · PI MORRISON, ASHBY J. · 2013 to 2014
$379k
The Influence of Chromatin Structure on Carcinogen SusceptibilityR21CA178529 · NCI · STANFORD UNIVERSITY · PI MORRISON, ASHBY J. · 2013 to 2014
$371k
OneView 4kX4k sCMOS camera for transmission electron microscopy applicationsS10OD028536 · OD · STANFORD UNIVERSITY · PI MULHOLLAND, JONATHAN W · 2020 to 2020
$195k
NCI NIH HHS R21 CA171050NCI NIH HHS R21 CA178529NIH HHS S10 OD028536
6 · The paper itself

Abstract

The p53 tumor suppressor is an indispensable regulator of DNA damage responses that accelerates carcinogenesis when mutated. In this report, we uncover a new mechanism by which p53 maintains genomic integrity in the absence of canonical DNA damage response activation. Specifically, loss of p53 dramatically alters chromatin structure at the nuclear periphery, allowing increased transmission of an environmental carcinogen, ultraviolet (UV) radiation, into the nucleus. Genome-wide mapping of UV-induced DNA lesions in p53-deficient primary cells reveals elevated lesion abundance in regions corresponding to locations of high mutation burden in malignant melanomas. These findings uncover a novel role of p53 in the suppression of mutations that contribute to cancer and highlight the critical influence of nuclear architecture in regulating sensitivity to carcinogens.

Identifiers

PMID39345432
PMCPMC11429700

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.