Evidence map›Paper›PMID 39345431›Full record

ArticlebioRxiv : the preprint server for biology2024

Vocal Call Locator Benchmark (VCL) for localizing rodent vocalizations from multi-channel audio.

Ralph E Peterson, Aramis Tanelus, Christopher Ick, Bartul Mimica, Niegil Francis, Violet J Ivan, Aman Choudhri, Annegret L Falkner, Mala Murthy, David M Schneider and 2 more

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Ralph E PetersonNYU, Center for Neural Science.
Aramis TanelusFlatiron Institute, Center for Computational Neuroscience.
Christopher IckNYU, Center for Data Science.
Bartul MimicaPrinceton Neuroscience Institute.
Niegil FrancisNYU, Center for Neural Science.
Violet J IvanNYU, Center for Neural Science.
Aman ChoudhriColumbia Univsersity.
Annegret L FalknerPrinceton Neuroscience Institute.
Mala MurthyPrinceton Neuroscience Institute.
David M SchneiderNYU, Center for Neural Science.
Dan H SanesNYU, Center for Neural Science.
Alex H WilliamsNYU, Center for Neural Science.

Funding

Social learning enhances auditory cortex sensitivity and task acquisitionR01DC020279 · NIDCD · NEW YORK UNIVERSITY · PI Dan Harvey Sanes · 2022 to 2026
$2.7M
Auditory cortical processing of self-generated soundsR01DC018802 · NIDCD · NEW YORK UNIVERSITY · PI David Michael Schneider · 2020 to 2026
$2.4M
Training program in computational approaches to brain and behaviorT90DA059110 · NIDA · NEW YORK UNIVERSITY · PI Wei Ji Ma · 2023 to 2026
$1.3M
Computational attribution and fusion of vocalizations, social behavior, and neural recordings in a naturalistic environmentR34DA059513 · NIDA · NEW YORK UNIVERSITY · PI SANES, DAN HARVEY, SCHNEIDER, DAVID MICHAEL · 2024 to 2025
$703k
NIDA NIH HHS R34 DA059513NIDA NIH HHS T90 DA059110NIDCD NIH HHS R01 DC018802NIDCD NIH HHS R01 DC020279
6 · The paper itself

Abstract

Understanding the behavioral and neural dynamics of social interactions is a goal of contemporary neuroscience. Many machine learning methods have emerged in recent years to make sense of complex video and neurophysiological data that result from these experiments. Less focus has been placed on understanding how animals process acoustic information, including social vocalizations. A critical step to bridge this gap is determining the senders and receivers of acoustic information in social interactions. While sound source localization (SSL) is a classic problem in signal processing, existing approaches are limited in their ability to localize animal-generated sounds in standard laboratory environments. Advances in deep learning methods for SSL are likely to help address these limitations, however there are currently no publicly available models, datasets, or benchmarks to systematically evaluate SSL algorithms in the domain of bioacoustics. Here, we present the VCL Benchmark: the first large-scale dataset for benchmarking SSL algorithms in rodents. We acquired synchronized video and multi-channel audio recordings of 767,295 sounds with annotated ground truth sources across 9 conditions. The dataset provides benchmarks which evaluate SSL performance on real data, simulated acoustic data, and a mixture of real and simulated data. We intend for this benchmark to facilitate knowledge transfer between the neuroscience and acoustic machine learning communities, which have had limited overlap.

Identifiers

PMID39345431
PMCPMC11430026

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.