Evidence map›Paper›PMID 39343789›Full record

ArticleScientific reports2024

Host miRNA and mRNA profiles during in DEF and duck after DHAV-1 infection.

Meng Wang, Zezheng Liu, Anchun Cheng, Mingshu Wang, Ying Wu, Qiao Yang, Bin Tian, Xuming Ou, Di Sun, Shaqiu Zhang and 6 more

Abstract read
In one paragraph

Article in Scientific reports, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors.

Meng Wang *Institute of Veterinary Medicine and Immunology, Sichuan Agricultural University, Chengdu, China.
Zezheng Liu *Institute of Veterinary Medicine and Immunology, Sichuan Agricultural University, Chengdu, China.
Anchun ChengInstitute of Veterinary Medicine and Immunology, Sichuan Agricultural University, Chengdu, China. chenganchun@vip.163.com.
Mingshu WangInstitute of Veterinary Medicine and Immunology, Sichuan Agricultural University, Chengdu, China.
Ying WuInstitute of Veterinary Medicine and Immunology, Sichuan Agricultural University, Chengdu, China.
Qiao YangInstitute of Veterinary Medicine and Immunology, Sichuan Agricultural University, Chengdu, China.
Bin TianInstitute of Veterinary Medicine and Immunology, Sichuan Agricultural University, Chengdu, China.
Xuming OuInstitute of Veterinary Medicine and Immunology, Sichuan Agricultural University, Chengdu, China.
Di SunInstitute of Veterinary Medicine and Immunology, Sichuan Agricultural University, Chengdu, China.
Shaqiu ZhangInstitute of Veterinary Medicine and Immunology, Sichuan Agricultural University, Chengdu, China.
Dekang ZhuKey Laboratory of Animal Disease and Human Health of Sichuan Province, Sichuan Agricultural University, Chengdu, China.
Renyong JiaInstitute of Veterinary Medicine and Immunology, Sichuan Agricultural University, Chengdu, China.
Shun ChenInstitute of Veterinary Medicine and Immunology, Sichuan Agricultural University, Chengdu, China.
Mafeng LiuInstitute of Veterinary Medicine and Immunology, Sichuan Agricultural University, Chengdu, China.
Xin Xin ZhaoInstitute of Veterinary Medicine and Immunology, Sichuan Agricultural University, Chengdu, China.
Juan HuangInstitute of Veterinary Medicine and Immunology, Sichuan Agricultural University, Chengdu, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

DHAV-1 is a highly infectious pathogen that can cause acute hepatitis in ducklings. MicroRNA (miRNA) plays an essential regulatory role in virus response. We characterized and compared miRNA and mRNA expression profiles in duck embryonic fibroblasts (DEF) and the liver of ducklings infected with DHAV-1. DHAV-1 infected DEF was divided into infection group (D group) and blank group (M group), and DHAV-1 infected duckling group was divided into infection group (H group) and blank group (N group). D vs. M have 130 differentially expressed (DE) miRNA (DEM) and 2204 differentially expressed (DE) mRNA (DEG), H vs. N have 72 DEM and 1976 DEG. By the intersection of D vs. M and H vs. N comparisons, 15 upregulated DEM, 5 downregulated DEM, 340 upregulated DEG and 50 downregulated DEG were found with both in vivo and in vitro DHAV-1 infection. In particular, we identified the same DE miRNA target genes and functional annotations of DE mRNA. We enriched with multiple gene ontology (GO) and the Kyoto Encyclopedia of Genes and Genomes (KEGG) pathways, which may have important roles in viral virulence, host immunity, and metabolism. We selected miR-155, which is co-upregulated, and found that miR-155 targets SOCS1 to inhibit DHVA-1 replication.

Indexed as

DucksFibroblastsMicroRNAsPoultry DiseasesRNA, MessengerAnimalsGene Expression ProfilingGene Expression RegulationHost-Pathogen InteractionsLiverMardivirusPicornaviridae InfectionsMicroRNAsRNA, MessengerDHAV-1miR-155miRNAmRNASOCS1

Identifiers

PMID39343789
PMCPMC11439951

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.