Evidence map›Paper›PMID 39342576›Full record

ArticleAsian Pacific journal of cancer prevention : APJCP2024

Circulating mRNA Expression of VEGF, PTEN, and SOCS1 as Potential Prognostic Predictor for Nasopharyngeal Carcinoma Progression.

Hidayat Sulistyo, Arifah Pelangi Nusa, Megawati Al'badly Ponco Dewi Poernomo, Fakhry Muhammad Lutfi Rahman, Rafif Rahmatullah, Thomas Adi Pangestu, Azizah Nur Afifah, Rhyceeva Ridzky Amania, Muhammad Miftahul Huda, Anton Budhi Dharmawan and 3 more

Abstract read
In one paragraph

Article in Asian Pacific journal of cancer prevention : APJCP, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0citing papers in PubMed
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1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Hidayat SulistyoDepartment of Pathology Anatomy, Faculty of Medicine, Jenderal Soedirman University, Purwokerto, Indonesia.
Arifah Pelangi NusaUndergraduate Student, Faculty of Medicine, Jenderal Soedirman University, Purwokerto, Indonesia.
Megawati Al'badly Ponco Dewi PoernomoUndergraduate Student, Faculty of Medicine, Jenderal Soedirman University, Purwokerto, Indonesia.
Fakhry Muhammad Lutfi RahmanUndergraduate Student, Faculty of Medicine, Jenderal Soedirman University, Purwokerto, Indonesia.
Rafif RahmatullahUndergraduate Student, Faculty of Medicine, Jenderal Soedirman University, Purwokerto, Indonesia.
Thomas Adi PangestuUndergraduate Student, Faculty of Medicine, Jenderal Soedirman University, Purwokerto, Indonesia.
Azizah Nur AfifahUndergraduate Student, Faculty of Medicine, Jenderal Soedirman University, Purwokerto, Indonesia.
Rhyceeva Ridzky AmaniaUndergraduate Student, Faculty of Medicine, Jenderal Soedirman University, Purwokerto, Indonesia.
Muhammad Miftahul HudaUndergraduate Student, Faculty of Medicine, Jenderal Soedirman University, Purwokerto, Indonesia.
Anton Budhi DharmawanDepartment of Ear, Nose, and Throat [ENT], Faculty of Medicine, Jenderal Soedirman University, Purwokerto, Indonesia.
Sekti Joko Sutono IslamantoDepartment of Ear, Nose, and Throat [ENT], Margono Hospital, Purwokerto, Indonesia.
Sofia MubarikaDepartment of Histology and Cell Biology, Faculty of Medicine, Public Health, and Nursing, Gadjah Mada University, Indonesia.
Tirta WardanaDepartment of Pathology Anatomy, Faculty of Medicine, Jenderal Soedirman University, Purwokerto, Indonesia.ORCID 0000-0002-1926-1345

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe molecular mechanisms underlying nasopharyngeal carcinoma (NPC) progression remain poorly understood. In particular, the roles of circulating mRNAs encoding key regulatory proteins have yet to be explored. This study aimed to identify NPC-associated expression signatures of circulating VEGF, PTEN, and SOCS1 mRNAs and their potential as biomarkers.

methodsA case-control study was conducted comprising 160 nasopharyngeal carcinoma (NPC) patients and 80 controls, from whom peripheral blood samples. Total RNA was extracted and the levels of VEGF, PTEN, and SOCS1 mRNAs were quantified using reverse transcription quantitative PCR (RT-qPCR). Relative expression was calculated using the 2-ΔΔCt method. Bioinformatic analyses, including GeneMANIA, Gene Ontology (GO), and KEGG pathway analysis, were performed to predict the functional roles and interactions of these mRNAs.

resultsWe identified significantly increased circulating VEGF mRNA in lymph node metastases (1.66-fold, p<0.05) and elevated SOCS1 mRNA in late-stage NPC (20-fold, p<0.05). PTEN mRNA was reduced 4.26-fold in NPC patients. These data suggest that circulating VEGF, PTEN, and SOCS1 mRNAs represent signatures of NPC progression and can potentially be biomarkers. Network analyses implicate these mRNAs in mechanisms enabling NPC pathogenesis.

conclusionsOur study reveals NPC-associated expression changes of circulating VEGF, PTEN, and SOCS1 mRNAs. These molecular signatures may serve as biomarkers during NPC progression and provide insights into underlying mechanisms. Further validation of their utility as prognostic indicators of NPC is warranted.

Indexed as

Biomarkers, TumorDisease ProgressionNasopharyngeal CarcinomaNasopharyngeal NeoplasmsPTEN PhosphohydrolaseRNA, MessengerSuppressor of Cytokine Signaling 1 ProteinVascular Endothelial Growth Factor AAdultCase-Control StudiesFemaleFollow-Up StudiesGene Expression Regulation, NeoplasticHumansLymphatic MetastasisMaleBiomarkers, TumorPTEN PhosphohydrolasePTEN protein, humanRNA, MessengerSOCS1 protein, humanSuppressor of Cytokine Signaling 1 ProteinVascular Endothelial Growth Factor AVEGFA protein, humancirculationclinical outcomemRNA expressionNasopharyngeal carcinomaPrognosis biomarker

Identifiers

PMID39342576
PMCPMC11700339

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.